BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036933
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38215.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t...   133   1e-29
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat...   129   3e-28

>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/129 (51%), Positives = 96/129 (74%)
 Frame = -1

Query: 394 VLRACSHAGLVDRGREIFDEISRVHNIRPTIEHYTCMVDLLSRANLLDEAREVIKEMPMK 215
           VL ACSH GLV+ GR+ F+++S ++N+RP +EHY CMVDLL RA L++EA E I+ MP++
Sbjct: 413 VLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIE 472

Query: 214 PDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKDSGAYILMSIIYASNDQWDNS 35
           PD FV GAL G  +IHG+  L     E V K++  +EP+  GAY+LMS IY+S ++W ++
Sbjct: 473 PDAFVLGALLGACKIHGKVEL----GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDA 528

Query: 34  MKMRRTMEE 8
           +K+R+TM+E
Sbjct: 529 LKLRKTMKE 537


>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/129 (51%), Positives = 96/129 (74%)
 Frame = -1

Query: 394 VLRACSHAGLVDRGREIFDEISRVHNIRPTIEHYTCMVDLLSRANLLDEAREVIKEMPMK 215
           VL ACSH GLV+ GR+ F+++S ++N+RP +EHY CMVDLL RA L++EA E I+ MP++
Sbjct: 435 VLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIE 494

Query: 214 PDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKDSGAYILMSIIYASNDQWDNS 35
           PD FV GAL G  +IHG+  L     E V K++  +EP+  GAY+LMS IY+S ++W ++
Sbjct: 495 PDAFVLGALLGACKIHGKVEL----GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDA 550

Query: 34  MKMRRTMEE 8
           +K+R+TM+E
Sbjct: 551 LKLRKTMKE 559


>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/131 (49%), Positives = 92/131 (70%)
 Frame = -1

Query: 394 VLRACSHAGLVDRGREIFDEISRVHNIRPTIEHYTCMVDLLSRANLLDEAREVIKEMPMK 215
           +L AC+HAGLVD GR+ F+ + RV  + P IEHY CMVDLL RA  LDEA +++K MPM+
Sbjct: 354 LLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPME 413

Query: 214 PDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKDSGAYILMSIIYASNDQWDNS 35
            +  VWGAL GG R+H +  L+    E V K+L +LEP +SG Y+L+S IY+++ +W+++
Sbjct: 414 ANAIVWGALLGGCRLHRDTQLV----EGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDA 469

Query: 34  MKMRRTMEEMG 2
            K+R  M E G
Sbjct: 470 AKIRSIMSERG 480


>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 678

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/131 (51%), Positives = 90/131 (68%)
 Frame = -1

Query: 394 VLRACSHAGLVDRGREIFDEISRVHNIRPTIEHYTCMVDLLSRANLLDEAREVIKEMPMK 215
           +L  C+HAGLVD GR  F+ +S   ++ PTIEHY CMVDLL+RA  LDEA  +IK MPMK
Sbjct: 413 LLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMK 472

Query: 214 PDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKDSGAYILMSIIYASNDQWDNS 35
            ++ VWG+L GG R+H E  L     E V K+L  LEP +SG Y+L+S IY+++ +WD +
Sbjct: 473 ANVIVWGSLLGGCRLHRETQLA----EHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEA 528

Query: 34  MKMRRTMEEMG 2
            K+R T+ E G
Sbjct: 529 EKIRSTVNEKG 539


>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/129 (48%), Positives = 88/129 (68%)
 Frame = -1

Query: 394 VLRACSHAGLVDRGREIFDEISRVHNIRPTIEHYTCMVDLLSRANLLDEAREVIKEMPMK 215
           +L  C+H G V+ GR+ F+ + RV ++ P+IEHY CMVDLL RA LL+EA ++I  MPMK
Sbjct: 423 LLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMK 482

Query: 214 PDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKDSGAYILMSIIYASNDQWDNS 35
           P+  VWGAL GG ++H +  L     E V K+L  LEP +SG Y+ +S IY+ N +W+ +
Sbjct: 483 PNAVVWGALLGGCKLHKDTHLA----EQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEA 538

Query: 34  MKMRRTMEE 8
            K+R TM+E
Sbjct: 539 EKIRSTMKE 547