BLASTX nr result

ID: Coptis23_contig00036927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036927
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266608.2| PREDICTED: exportin-4-like [Vitis vinifera]       153   2e-35
emb|CBI22377.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002521978.1| protein with unknown function [Ricinus commu...   144   7e-33
ref|NP_187099.6| uncharacterized protein [Arabidopsis thaliana] ...   143   2e-32
ref|XP_002882356.1| hypothetical protein ARALYDRAFT_317312 [Arab...   140   8e-32

>ref|XP_002266608.2| PREDICTED: exportin-4-like [Vitis vinifera]
          Length = 1123

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/104 (71%), Positives = 85/104 (81%)
 Frame = -3

Query: 312 ENSQVGNARFQAVAALRDVAVREWGLLQSVDKKGLISFCLGFLFQHSGSAEGYLLAKISA 133
           ENSQV NARFQA AA+RD A+REWGLL S DKK LISFCL F+ QH+ S EGY+ +K+S+
Sbjct: 60  ENSQVANARFQAAAAIRDAAIREWGLLTSDDKKSLISFCLCFVMQHASSPEGYVQSKVSS 119

Query: 132 VAAQLLKRGWLDFTLAEKEAFLSEVKQVVLGVHGFVAQFIGMNF 1
           VAAQL+KRGWLDF  AEKEAF+ EVKQ VLGVHG   QF G+NF
Sbjct: 120 VAAQLMKRGWLDFAAAEKEAFMYEVKQAVLGVHGVDVQFTGINF 163


>emb|CBI22377.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/104 (71%), Positives = 85/104 (81%)
 Frame = -3

Query: 312 ENSQVGNARFQAVAALRDVAVREWGLLQSVDKKGLISFCLGFLFQHSGSAEGYLLAKISA 133
           ENSQV NARFQA AA+RD A+REWGLL S DKK LISFCL F+ QH+ S EGY+ +K+S+
Sbjct: 69  ENSQVANARFQAAAAIRDAAIREWGLLTSDDKKSLISFCLCFVMQHASSPEGYVQSKVSS 128

Query: 132 VAAQLLKRGWLDFTLAEKEAFLSEVKQVVLGVHGFVAQFIGMNF 1
           VAAQL+KRGWLDF  AEKEAF+ EVKQ VLGVHG   QF G+NF
Sbjct: 129 VAAQLMKRGWLDFAAAEKEAFMYEVKQAVLGVHGVDVQFTGINF 172


>ref|XP_002521978.1| protein with unknown function [Ricinus communis]
           gi|223538782|gb|EEF40382.1| protein with unknown
           function [Ricinus communis]
          Length = 1165

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/104 (64%), Positives = 81/104 (77%)
 Frame = -3

Query: 312 ENSQVGNARFQAVAALRDVAVREWGLLQSVDKKGLISFCLGFLFQHSGSAEGYLLAKISA 133
           ENSQV NARFQA AA+RD A+REW  L   DKK LISFCL ++ QH+GS++GY+  K+S+
Sbjct: 59  ENSQVANARFQAAAAIRDAAIREWSFLTGDDKKSLISFCLCYVMQHAGSSDGYVQVKVSS 118

Query: 132 VAAQLLKRGWLDFTLAEKEAFLSEVKQVVLGVHGFVAQFIGMNF 1
           VAAQL+KRGWLDFT AEKE F  +V Q VLG+HG   QF G+NF
Sbjct: 119 VAAQLIKRGWLDFTAAEKETFFYQVNQAVLGIHGIDVQFSGINF 162


>ref|NP_187099.6| uncharacterized protein [Arabidopsis thaliana]
           gi|332640567|gb|AEE74088.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1118

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/104 (62%), Positives = 84/104 (80%)
 Frame = -3

Query: 312 ENSQVGNARFQAVAALRDVAVREWGLLQSVDKKGLISFCLGFLFQHSGSAEGYLLAKISA 133
           ENSQV NARFQA AA+R+ A+REW  L + DK GLISFCLG++ QH+ S+EGY+L+K+S+
Sbjct: 66  ENSQVANARFQAAAAIRESAIREWSFLATDDKGGLISFCLGYVMQHANSSEGYVLSKVSS 125

Query: 132 VAAQLLKRGWLDFTLAEKEAFLSEVKQVVLGVHGFVAQFIGMNF 1
           VAAQL+KRGWL+FT A+KE F  ++ Q +LG HG   QFIG+NF
Sbjct: 126 VAAQLMKRGWLEFTPAQKEVFFYQINQAILGSHGLDVQFIGVNF 169


>ref|XP_002882356.1| hypothetical protein ARALYDRAFT_317312 [Arabidopsis lyrata subsp.
           lyrata] gi|297328196|gb|EFH58615.1| hypothetical protein
           ARALYDRAFT_317312 [Arabidopsis lyrata subsp. lyrata]
          Length = 1123

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/104 (61%), Positives = 83/104 (79%)
 Frame = -3

Query: 312 ENSQVGNARFQAVAALRDVAVREWGLLQSVDKKGLISFCLGFLFQHSGSAEGYLLAKISA 133
           ENSQV NARFQA AA+R+ A+REW  L + DK GLI+FCLG++ QH+ S+EGY+L+K+S+
Sbjct: 42  ENSQVANARFQAAAAIREAAIREWSFLATDDKGGLINFCLGYVMQHANSSEGYVLSKVSS 101

Query: 132 VAAQLLKRGWLDFTLAEKEAFLSEVKQVVLGVHGFVAQFIGMNF 1
           VAAQL+KRGWL+FT AEKE F  ++ Q +LG  G   QFIG+NF
Sbjct: 102 VAAQLMKRGWLEFTPAEKEVFFYQINQAILGSRGLDVQFIGVNF 145


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