BLASTX nr result

ID: Coptis23_contig00036912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036912
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17425.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250...   102   2e-20
ref|XP_002533653.1| transcription factor, putative [Ricinus comm...   101   5e-20
dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas]                          92   3e-17
ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|...    92   6e-17

>emb|CBI17425.3| unnamed protein product [Vitis vinifera]
          Length = 317

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/65 (72%), Positives = 56/65 (86%)
 Frame = +3

Query: 84  QNPKRLRENPTSSSLACTRLPNTTSGLEVENFPAEVNSQAVFRCVRVSGMSDADDEFAYQ 263
           +NPKR RENP+SS+LACTRLP  TSGLE+ NFP+EVNS AVFRCVRVS + + DD++AYQ
Sbjct: 143 ENPKRQRENPSSSALACTRLPTHTSGLEIANFPSEVNSPAVFRCVRVSSIDETDDQYAYQ 202

Query: 264 AAVNI 278
            AVNI
Sbjct: 203 TAVNI 207


>ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250664 [Vitis vinifera]
          Length = 344

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/65 (72%), Positives = 56/65 (86%)
 Frame = +3

Query: 84  QNPKRLRENPTSSSLACTRLPNTTSGLEVENFPAEVNSQAVFRCVRVSGMSDADDEFAYQ 263
           +NPKR RENP+SS+LACTRLP  TSGLE+ NFP+EVNS AVFRCVRVS + + DD++AYQ
Sbjct: 190 ENPKRQRENPSSSALACTRLPTHTSGLEIANFPSEVNSPAVFRCVRVSSIDETDDQYAYQ 249

Query: 264 AAVNI 278
            AVNI
Sbjct: 250 TAVNI 254


>ref|XP_002533653.1| transcription factor, putative [Ricinus communis]
           gi|223526448|gb|EEF28724.1| transcription factor,
           putative [Ricinus communis]
          Length = 350

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/70 (71%), Positives = 59/70 (84%), Gaps = 5/70 (7%)
 Frame = +3

Query: 84  QNPKRLRENPTSSSLACT-----RLPNTTSGLEVENFPAEVNSQAVFRCVRVSGMSDADD 248
           QNPKRLRENPTSSSLACT     RLPN +SGLE+ NFP+EV+S AVFRCV+VSG+ + DD
Sbjct: 187 QNPKRLRENPTSSSLACTPATNTRLPNNSSGLELGNFPSEVSSPAVFRCVKVSGIDENDD 246

Query: 249 EFAYQAAVNI 278
           ++AYQ AVNI
Sbjct: 247 QYAYQTAVNI 256


>dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas]
          Length = 315

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/66 (71%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
 Frame = +3

Query: 84  QNPKRLRENPTSS-SLACTRLPNTTSGLEVENFPAEVNSQAVFRCVRVSGMSDADDEFAY 260
           +NPKR REN   + SLACTRL  TTSGLEV +FP EVNS AVFRCV+VS M DAD++FAY
Sbjct: 169 ENPKRQRENQGGAPSLACTRLGTTTSGLEVAHFPPEVNSPAVFRCVKVSAMDDADEQFAY 228

Query: 261 QAAVNI 278
           Q AVNI
Sbjct: 229 QTAVNI 234


>ref|XP_002327777.1| short internodes 2 [Populus trichocarpa]
           gi|222836862|gb|EEE75255.1| short internodes 2 [Populus
           trichocarpa]
          Length = 344

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/65 (66%), Positives = 53/65 (81%)
 Frame = +3

Query: 84  QNPKRLRENPTSSSLACTRLPNTTSGLEVENFPAEVNSQAVFRCVRVSGMSDADDEFAYQ 263
           +NPKR RENP+ SSLACT L N  SGLE+ NFPAEV+S A+FRCVRVSG+ ++++  AYQ
Sbjct: 187 ENPKRQRENPSPSSLACTHLANNMSGLELGNFPAEVSSPALFRCVRVSGIDESEEMLAYQ 246

Query: 264 AAVNI 278
            AVNI
Sbjct: 247 TAVNI 251


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