BLASTX nr result
ID: Coptis23_contig00036902
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00036902
(564 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24305.3| unnamed protein product [Vitis vinifera] 163 7e-74
ref|XP_002267102.2| PREDICTED: tyrosine-specific transport prote... 163 7e-74
ref|XP_002523215.1| Tyrosine-specific transport protein, putativ... 161 1e-71
ref|XP_002299650.1| predicted protein [Populus trichocarpa] gi|2... 155 5e-70
ref|XP_002463342.1| hypothetical protein SORBIDRAFT_02g042070 [S... 151 2e-66
>emb|CBI24305.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 163 bits (412), Expect(3) = 7e-74
Identities = 83/100 (83%), Positives = 88/100 (88%)
Frame = +1
Query: 1 SKLNQTTLKREPGSLTSAILLVGGTTVGAGILAIPAVTQEAGFLASAVTCIFCWIYMVVT 180
S LNQ TLKREPGSL+SAI LV GTTVGAGILAIPAVTQE+GFLASAVTC CW+YMVVT
Sbjct: 545 SNLNQATLKREPGSLSSAIFLVAGTTVGAGILAIPAVTQESGFLASAVTCFLCWVYMVVT 604
Query: 181 GLLIAEVNVSTMRELGSGGVSLVTMATRTLGKVGAQIV*W 300
GLLIAEVNV+TM ELGSGGVSLV+MA RTLG VG QI W
Sbjct: 605 GLLIAEVNVNTMCELGSGGVSLVSMAMRTLGPVGVQIACW 644
Score = 89.0 bits (219), Expect(3) = 7e-74
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +3
Query: 309 FIHYALLVAYVARSSDILTNFLGIPLWESATLFSLVLGGVCYYGRG*PVGTCIGTV 476
FIHYALLVAYVARSSDILTNFLGIP+WESATLFSLV GG+CY+G +G G +
Sbjct: 648 FIHYALLVAYVARSSDILTNFLGIPIWESATLFSLVFGGICYFGSQRFIGAINGVL 703
Score = 72.4 bits (176), Expect(3) = 7e-74
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +2
Query: 449 TGGDLHWDSLLKANFEAVPISIPIIALSFVYQNVVPVL 562
T GDL WD+LLKANFEAVP+SIPIIALSFVYQNVVPVL
Sbjct: 718 TSGDLQWDALLKANFEAVPLSIPIIALSFVYQNVVPVL 755
>ref|XP_002267102.2| PREDICTED: tyrosine-specific transport protein-like [Vitis
vinifera]
Length = 482
Score = 163 bits (412), Expect(3) = 7e-74
Identities = 83/100 (83%), Positives = 88/100 (88%)
Frame = +1
Query: 1 SKLNQTTLKREPGSLTSAILLVGGTTVGAGILAIPAVTQEAGFLASAVTCIFCWIYMVVT 180
S LNQ TLKREPGSL+SAI LV GTTVGAGILAIPAVTQE+GFLASAVTC CW+YMVVT
Sbjct: 79 SNLNQATLKREPGSLSSAIFLVAGTTVGAGILAIPAVTQESGFLASAVTCFLCWVYMVVT 138
Query: 181 GLLIAEVNVSTMRELGSGGVSLVTMATRTLGKVGAQIV*W 300
GLLIAEVNV+TM ELGSGGVSLV+MA RTLG VG QI W
Sbjct: 139 GLLIAEVNVNTMCELGSGGVSLVSMAMRTLGPVGVQIACW 178
Score = 89.0 bits (219), Expect(3) = 7e-74
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +3
Query: 309 FIHYALLVAYVARSSDILTNFLGIPLWESATLFSLVLGGVCYYGRG*PVGTCIGTV 476
FIHYALLVAYVARSSDILTNFLGIP+WESATLFSLV GG+CY+G +G G +
Sbjct: 182 FIHYALLVAYVARSSDILTNFLGIPIWESATLFSLVFGGICYFGSQRFIGAINGVL 237
Score = 72.4 bits (176), Expect(3) = 7e-74
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +2
Query: 449 TGGDLHWDSLLKANFEAVPISIPIIALSFVYQNVVPVL 562
T GDL WD+LLKANFEAVP+SIPIIALSFVYQNVVPVL
Sbjct: 252 TSGDLQWDALLKANFEAVPLSIPIIALSFVYQNVVPVL 289
>ref|XP_002523215.1| Tyrosine-specific transport protein, putative [Ricinus communis]
gi|223537511|gb|EEF39136.1| Tyrosine-specific transport
protein, putative [Ricinus communis]
Length = 477
Score = 161 bits (408), Expect(3) = 1e-71
Identities = 80/100 (80%), Positives = 88/100 (88%)
Frame = +1
Query: 1 SKLNQTTLKREPGSLTSAILLVGGTTVGAGILAIPAVTQEAGFLASAVTCIFCWIYMVVT 180
S LNQ TLKREPGSL+SAI LV GTTVGAGILAIPAVTQE+GFLASA+ CIFCWIYMV T
Sbjct: 75 SNLNQATLKREPGSLSSAIFLVAGTTVGAGILAIPAVTQESGFLASAMACIFCWIYMVAT 134
Query: 181 GLLIAEVNVSTMRELGSGGVSLVTMATRTLGKVGAQIV*W 300
GLL+AEVN++TM ELGSGGVSLV+MA RTLG +G QI W
Sbjct: 135 GLLVAEVNINTMCELGSGGVSLVSMARRTLGTIGVQIACW 174
Score = 89.7 bits (221), Expect(3) = 1e-71
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 309 FIHYALLVAYVARSSDILTNFLGIPLWESATLFSLVLGGVCYYG 440
FIHYALLVAYVARSSDI+TNFLGIPLWESATLFSLVLGG+CY+G
Sbjct: 178 FIHYALLVAYVARSSDIVTNFLGIPLWESATLFSLVLGGICYFG 221
Score = 65.5 bits (158), Expect(3) = 1e-71
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 446 LTGGDLHWDSLLKANFEAVPISIPIIALSFVYQNVVPVL 562
+ GDL D+LLKANFEAVP+SIPIIALSFVYQNVVPVL
Sbjct: 247 VASGDLQLDALLKANFEAVPMSIPIIALSFVYQNVVPVL 285
>ref|XP_002299650.1| predicted protein [Populus trichocarpa] gi|222846908|gb|EEE84455.1|
predicted protein [Populus trichocarpa]
Length = 418
Score = 155 bits (393), Expect(3) = 5e-70
Identities = 79/100 (79%), Positives = 86/100 (86%)
Frame = +1
Query: 1 SKLNQTTLKREPGSLTSAILLVGGTTVGAGILAIPAVTQEAGFLASAVTCIFCWIYMVVT 180
S LNQ TLKREPGSL+SAILLV GTT+GAGILAIPAVTQE+GFLAS+V CI CWI+MV T
Sbjct: 16 SNLNQVTLKREPGSLSSAILLVAGTTIGAGILAIPAVTQESGFLASSVACILCWIFMVTT 75
Query: 181 GLLIAEVNVSTMRELGSGGVSLVTMATRTLGKVGAQIV*W 300
GLLIAEVNV+TM ELGSGGVSLV+MA RTLG G Q W
Sbjct: 76 GLLIAEVNVNTMCELGSGGVSLVSMAKRTLGVAGVQFSCW 115
Score = 89.4 bits (220), Expect(3) = 5e-70
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +3
Query: 309 FIHYALLVAYVARSSDILTNFLGIPLWESATLFSLVLGGVCYYGRG*PVGTCIGTV 476
FIHYALL+AYVARSSDILTNFLGIPLWESATLFSLV GG+CY+G +G G +
Sbjct: 119 FIHYALLIAYVARSSDILTNFLGIPLWESATLFSLVFGGICYFGSQRFIGAVNGVL 174
Score = 66.2 bits (160), Expect(3) = 5e-70
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +2
Query: 455 GDLHWDSLLKANFEAVPISIPIIALSFVYQNVVPVL 562
GDLH D+LLKANF AVP+SIPIIALSFVYQNVVPVL
Sbjct: 191 GDLHLDALLKANFSAVPMSIPIIALSFVYQNVVPVL 226
>ref|XP_002463342.1| hypothetical protein SORBIDRAFT_02g042070 [Sorghum bicolor]
gi|241926719|gb|EER99863.1| hypothetical protein
SORBIDRAFT_02g042070 [Sorghum bicolor]
Length = 480
Score = 151 bits (381), Expect(3) = 2e-66
Identities = 76/96 (79%), Positives = 84/96 (87%)
Frame = +1
Query: 1 SKLNQTTLKREPGSLTSAILLVGGTTVGAGILAIPAVTQEAGFLASAVTCIFCWIYMVVT 180
S LN+ T+K EPGS+TSAI LV GTTVGAGILAIPAVTQEAGFLASAV CI CW+YMVVT
Sbjct: 75 SNLNKATMKHEPGSVTSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVICILCWLYMVVT 134
Query: 181 GLLIAEVNVSTMRELGSGGVSLVTMATRTLGKVGAQ 288
GLL+AEVNV+TM ELGSGGVSLV+MA RTLG G +
Sbjct: 135 GLLVAEVNVNTMCELGSGGVSLVSMAMRTLGTFGVR 170
Score = 84.7 bits (208), Expect(3) = 2e-66
Identities = 41/54 (75%), Positives = 44/54 (81%)
Frame = +3
Query: 309 FIHYALLVAYVARSSDILTNFLGIPLWESATLFSLVLGGVCYYGRG*PVGTCIG 470
FIHYALLVAYVARSSDI+TN LGIPLWESATLFSL GGVCY+G +G G
Sbjct: 178 FIHYALLVAYVARSSDIITNSLGIPLWESATLFSLAFGGVCYFGSQRLIGAVNG 231
Score = 63.5 bits (153), Expect(3) = 2e-66
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +2
Query: 446 LTGGDLHWDSLLKANFEAVPISIPIIALSFVYQNVVPVL 562
+ G+LHW SLL+ANF A P SIPIIALSFVYQNVVPVL
Sbjct: 247 VASGNLHWSSLLEANFAAAPQSIPIIALSFVYQNVVPVL 285