BLASTX nr result

ID: Coptis23_contig00036889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036889
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545054.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    82   1e-13
ref|XP_003517928.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    82   1e-13
ref|XP_002468163.1| hypothetical protein SORBIDRAFT_01g040730 [S...    82   1e-13
ref|XP_004144566.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    80   3e-13
ref|XP_003618131.1| FAR1-related protein [Medicago truncatula] g...    80   3e-13

>ref|XP_003545054.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 777

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
 Frame = -3

Query: 680 GFSIRKSHVERSRVDHTLISRKFVCVRQGFRSLKDKRYQGK-VVRHRQVTRVDCRAAMII 504
           GFS R S   RSR D  +I R+FVC ++GFR+L +KR + + + R R +TRV C+A++ +
Sbjct: 79  GFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSV 138

Query: 503 KRR-CGKWIVHRFLKEHNHDLGD------LTSSCQLRDSTKTILQAL 384
           K +  GKWIV  F++EHNH+L        L S  Q+  + KT++  L
Sbjct: 139 KMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTL 185


>ref|XP_003517928.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 776

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
 Frame = -3

Query: 680 GFSIRKSHVERSRVDHTLISRKFVCVRQGFRSLKDKRYQGK-VVRHRQVTRVDCRAAMII 504
           GFS R S   RSR D  +I R+FVC ++GFR+L +KR + + + R R +TRV C+A++ +
Sbjct: 79  GFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSV 138

Query: 503 KRR-CGKWIVHRFLKEHNHDLGD------LTSSCQLRDSTKTILQAL 384
           K +  GKWIV  F++EHNH+L        L S  Q+  + KT++  L
Sbjct: 139 KMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTL 185


>ref|XP_002468163.1| hypothetical protein SORBIDRAFT_01g040730 [Sorghum bicolor]
           gi|241922017|gb|EER95161.1| hypothetical protein
           SORBIDRAFT_01g040730 [Sorghum bicolor]
          Length = 663

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
 Frame = -3

Query: 680 GFSIRKSHVERSRVDHTLISRKFVCVRQGFRSLKDKRY---QGKVVRHRQVTRVDCRAAM 510
           GF  R S   RSR D+++ISR+ VC ++GFR L+ K+    +GK  R R +TRV C+A +
Sbjct: 217 GFRARISRYCRSRRDNSIISRQIVCSKEGFRELRTKKVMTDEGKTKRPRMITRVGCKAMI 276

Query: 509 IIKR-RCGKWIVHRFLKEHNHDLGDLTSSCQLRDSTKTILQALYKTQCVDTEDTISRGKK 333
           ++K+   GKW+V +F KEHNH    L+ S  + DS    L  LY   C +       G  
Sbjct: 277 VVKKMNSGKWMVSKFEKEHNH---SLSHSKMIPDS----LTVLYNNLCQEAIKFAKEGSV 329

Query: 332 ILDCNMVASDSIQE 291
             +   VA  +++E
Sbjct: 330 TEEIYHVAVSALKE 343



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
 Frame = -3

Query: 680 GFSIRKSHVERSRVDHTLISRKFVCVRQGFRSLK--DKRYQGKVVRHRQVTRVDCRAAMI 507
           GF IR S   RSR D+++ISR+ VC ++GF   +  D  +  +  + R  TRV C+A ++
Sbjct: 80  GFRIRISRYTRSRRDNSVISRRIVCSKEGFHETRACDGLHSEQKQKERAGTRVGCKAMIL 139

Query: 506 IKR-RCGKWIVHRFLKEHNH 450
           IK+   GKW+V +F+K HNH
Sbjct: 140 IKKFDPGKWMVTKFVKNHNH 159


>ref|XP_004144566.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis sativus]
           gi|449506920|ref|XP_004162884.1| PREDICTED: protein
           FAR1-RELATED SEQUENCE 5-like [Cucumis sativus]
          Length = 790

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
 Frame = -3

Query: 680 GFSIRKSHVERSRVDHTLISRKFVCVRQGFRSLKDKRYQGK-VVRHRQVTRVDCRAAMII 504
           GFS R S   RSR D  +I R+FVC ++GFR+L +KR + + + R R +TRV C+A++ +
Sbjct: 91  GFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSV 150

Query: 503 KRR-CGKWIVHRFLKEHNHDLGD------LTSSCQLRDSTKTILQAL 384
           K    GKW+V  F++EHNH+L        L S  Q+    KT++  L
Sbjct: 151 KMHDSGKWVVSGFVREHNHELVPPDQVHCLRSHRQISGPAKTLIDTL 197


>ref|XP_003618131.1| FAR1-related protein [Medicago truncatula]
           gi|355519466|gb|AET01090.1| FAR1-related protein
           [Medicago truncatula]
          Length = 786

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
 Frame = -3

Query: 680 GFSIRKSHVERSRVDHTLISRKFVCVRQGFRSLKDKRYQGK-VVRHRQVTRVDCRAAMII 504
           GFS R S   RSR D  +I R+FVC ++GFR+L +KR + + + R R VTRV C+A++ +
Sbjct: 84  GFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTVTRVGCKASLSV 143

Query: 503 KRR--CGKWIVHRFLKEHNHDLGD------LTSSCQLRDSTKTILQAL 384
           K      KWIV  F++EHNH+L        L S  Q+  S KT++  L
Sbjct: 144 KMHDSSAKWIVSGFVREHNHELVPPDQVHCLRSHRQISGSAKTLIDTL 191


Top