BLASTX nr result

ID: Coptis23_contig00036849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036849
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20238.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-l...   175   4e-42
ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42
ref|XP_003553695.1| PREDICTED: protein transport protein Sec24-l...   173   1e-41
ref|XP_003520784.1| PREDICTED: protein transport protein Sec24-l...   173   1e-41

>emb|CBI20238.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  175 bits (443), Expect = 4e-42
 Identities = 94/159 (59%), Positives = 116/159 (72%), Gaps = 1/159 (0%)
 Frame = -3

Query: 497  KLLYPTLIRVDKYLTKEHANVDELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDL 318
            KLLYP+LIR+D+YL K  A  DEL     +LP+ A+SL S GLYIYDDG R +IWFG+ L
Sbjct: 793  KLLYPSLIRIDEYLLKPTAQADEL----KRLPLVAESLDSRGLYIYDDGFRFVIWFGRML 848

Query: 317  FSSIFSNLLGVNSSDFI-DISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQG 141
               I  NLLG    DF  D+SK++L   DNE+SRKLM +L++ R+SD S YQLCHLVRQG
Sbjct: 849  SPEIAMNLLG---QDFAADLSKVSLYEHDNEMSRKLMGILKKFRESDPSYYQLCHLVRQG 905

Query: 140  DQPREISLLLGNLVEDKIESTSGYIDWMLQSYRLVQQSA 24
            +QPRE   LL NLVED+I  T+GY DW+LQ +R VQQ+A
Sbjct: 906  EQPREGFFLLANLVEDQIGGTNGYADWILQIHRQVQQNA 944


>ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-like At3g07100-like [Vitis
            vinifera]
          Length = 1052

 Score =  175 bits (443), Expect = 4e-42
 Identities = 94/159 (59%), Positives = 116/159 (72%), Gaps = 1/159 (0%)
 Frame = -3

Query: 497  KLLYPTLIRVDKYLTKEHANVDELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDL 318
            KLLYP+LIR+D+YL K  A  DEL     +LP+ A+SL S GLYIYDDG R +IWFG+ L
Sbjct: 901  KLLYPSLIRIDEYLLKPTAQADEL----KRLPLVAESLDSRGLYIYDDGFRFVIWFGRML 956

Query: 317  FSSIFSNLLGVNSSDFI-DISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQG 141
               I  NLLG    DF  D+SK++L   DNE+SRKLM +L++ R+SD S YQLCHLVRQG
Sbjct: 957  SPEIAMNLLG---QDFAADLSKVSLYEHDNEMSRKLMGILKKFRESDPSYYQLCHLVRQG 1013

Query: 140  DQPREISLLLGNLVEDKIESTSGYIDWMLQSYRLVQQSA 24
            +QPRE   LL NLVED+I  T+GY DW+LQ +R VQQ+A
Sbjct: 1014 EQPREGFFLLANLVEDQIGGTNGYADWILQIHRQVQQNA 1052


>ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|222865356|gb|EEF02487.1|
            predicted protein [Populus trichocarpa]
          Length = 1037

 Score =  174 bits (440), Expect = 9e-42
 Identities = 87/158 (55%), Positives = 116/158 (73%)
 Frame = -3

Query: 497  KLLYPTLIRVDKYLTKEHANVDELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDL 318
            KLLYP+LIRVD+YL K  A  DE   I+ +LP+ ++SL S GLY+YDDG R ++WFG+  
Sbjct: 882  KLLYPSLIRVDEYLLKPSAQADEFKNIMKRLPLTSESLDSRGLYVYDDGFRFVVWFGRMF 941

Query: 317  FSSIFSNLLGVNSSDFIDISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQGD 138
               +  NLLG +++  ++ SK+ L   D E+SRKLM +L+++RDSD S YQLC+LVRQG+
Sbjct: 942  SPDVAMNLLGQDAA--VEFSKVALGKHDTEMSRKLMGLLKKLRDSDPSYYQLCNLVRQGE 999

Query: 137  QPREISLLLGNLVEDKIESTSGYIDWMLQSYRLVQQSA 24
            QPRE  LLL NLVED+I   SGY DWM+Q +R VQQ+A
Sbjct: 1000 QPREGYLLLTNLVEDQIGGASGYSDWMVQIHRQVQQNA 1037


>ref|XP_003553695.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
            [Glycine max]
          Length = 1026

 Score =  173 bits (439), Expect = 1e-41
 Identities = 87/157 (55%), Positives = 116/157 (73%)
 Frame = -3

Query: 497  KLLYPTLIRVDKYLTKEHANVDELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDL 318
            KLLYP+LIR+D+YL K     ++L  +  +LP+  +SL S GLYIYDDG+R IIWFG+ +
Sbjct: 872  KLLYPSLIRLDEYLLKASVQANDLKSVERRLPLTGESLDSRGLYIYDDGIRFIIWFGRVI 931

Query: 317  FSSIFSNLLGVNSSDFIDISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQGD 138
               I  NLLG + +   ++SK  LS  DNE+SR+L+KVLE++R++DR+ YQLCHLVRQG+
Sbjct: 932  SPDIAKNLLGADFA--AELSKTTLSEHDNEMSRRLVKVLEKLRNTDRAYYQLCHLVRQGE 989

Query: 137  QPREISLLLGNLVEDKIESTSGYIDWMLQSYRLVQQS 27
            QP+E  LLL NLVED++   SGY +WMLQ  R VQQS
Sbjct: 990  QPKEGFLLLANLVEDQMGGNSGYAEWMLQISRQVQQS 1026


>ref|XP_003520784.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
            [Glycine max]
          Length = 1028

 Score =  173 bits (438), Expect = 1e-41
 Identities = 88/157 (56%), Positives = 114/157 (72%)
 Frame = -3

Query: 497  KLLYPTLIRVDKYLTKEHANVDELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDL 318
            KLLYP+LIR+D+YL K     DE+  +  +LP+  +SL S GLYIYDDG R IIWFG+ +
Sbjct: 874  KLLYPSLIRLDEYLLKASVQADEVQSVERRLPLTGESLDSRGLYIYDDGFRFIIWFGRVI 933

Query: 317  FSSIFSNLLGVNSSDFIDISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQGD 138
               I  NLLG + +   ++SK  LS  DNE+SR+L+KVLE++R +DR+ YQLCHLVRQG+
Sbjct: 934  SPDIAKNLLGADFA--AELSKTTLSEHDNEMSRRLVKVLEKLRYTDRAYYQLCHLVRQGE 991

Query: 137  QPREISLLLGNLVEDKIESTSGYIDWMLQSYRLVQQS 27
            QP+E  LLL NLVED++   SGY +WMLQ  R VQQS
Sbjct: 992  QPKEGFLLLSNLVEDQMGGNSGYAEWMLQISRQVQQS 1028


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