BLASTX nr result

ID: Coptis23_contig00036811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036811
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534042.1| conserved hypothetical protein [Ricinus comm...    87   2e-15
ref|XP_002327638.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_003635342.1| PREDICTED: transmembrane protein 63A-like [V...    84   2e-14
ref|XP_003629245.1| Transmembrane protein 63C [Medicago truncatu...    84   2e-14
ref|XP_004166972.1| PREDICTED: transmembrane protein 63B-like [C...    83   2e-14

>ref|XP_002534042.1| conserved hypothetical protein [Ricinus communis]
           gi|223525949|gb|EEF28346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 807

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/79 (54%), Positives = 53/79 (67%)
 Frame = +3

Query: 6   MDDQFSMTTINHIQKGSGXXXXXXXXXXXXXXXXXXGIGMIEERLRITRFRDGNGNVSST 185
           +DDQFS TTINHI+KGS                   G+ +IEERL+ITRFRDGNGN+S  
Sbjct: 126 LDDQFSKTTINHIEKGSAFLWVHFVFVVIVVVLVHFGMSVIEERLKITRFRDGNGNLSDP 185

Query: 186 SGNDVAIFTIMVQGLPKTL 242
           + +  AIFTI+VQGLPK+L
Sbjct: 186 NADSTAIFTIIVQGLPKSL 204


>ref|XP_002327638.1| predicted protein [Populus trichocarpa] gi|222836723|gb|EEE75116.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/79 (50%), Positives = 54/79 (68%)
 Frame = +3

Query: 6   MDDQFSMTTINHIQKGSGXXXXXXXXXXXXXXXXXXGIGMIEERLRITRFRDGNGNVSST 185
           ++D+FS TTINHI+KGS                   G+ +IE+RL++TRFRDGNGN+S  
Sbjct: 120 INDEFSKTTINHIEKGSSFLWIHFVFVVIVVLLAHFGMSLIEKRLKVTRFRDGNGNLSDP 179

Query: 186 SGNDVAIFTIMVQGLPKTL 242
           + N +AIFTIMVQGLPK++
Sbjct: 180 NANSIAIFTIMVQGLPKSI 198


>ref|XP_003635342.1| PREDICTED: transmembrane protein 63A-like [Vitis vinifera]
          Length = 558

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/78 (53%), Positives = 50/78 (64%)
 Frame = +3

Query: 9   DDQFSMTTINHIQKGSGXXXXXXXXXXXXXXXXXXGIGMIEERLRITRFRDGNGNVSSTS 188
           +DQFS TTINHI+KGS                   GI  +EERL+ITRFRDG+GN S  +
Sbjct: 137 EDQFSKTTINHIEKGSALLWIHFLFVVIVVFLVHFGISAVEERLKITRFRDGSGNPSDPN 196

Query: 189 GNDVAIFTIMVQGLPKTL 242
            +  AIFTIMVQG+PKTL
Sbjct: 197 ASSTAIFTIMVQGIPKTL 214


>ref|XP_003629245.1| Transmembrane protein 63C [Medicago truncatula]
           gi|355523267|gb|AET03721.1| Transmembrane protein 63C
           [Medicago truncatula]
          Length = 887

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/79 (56%), Positives = 48/79 (60%)
 Frame = +3

Query: 6   MDDQFSMTTINHIQKGSGXXXXXXXXXXXXXXXXXXGIGMIEERLRITRFRDGNGNVSST 185
           +DDQFS TTINHI KGS                   GI   EERLRITRFRDG GN+S  
Sbjct: 121 LDDQFSKTTINHIPKGSPLLWIHFIFAVVVVLLVHFGISATEERLRITRFRDGYGNLSDP 180

Query: 186 SGNDVAIFTIMVQGLPKTL 242
           S N  AIFTIMVQGLPK +
Sbjct: 181 SANSSAIFTIMVQGLPKII 199


>ref|XP_004166972.1| PREDICTED: transmembrane protein 63B-like [Cucumis sativus]
          Length = 809

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/79 (53%), Positives = 51/79 (64%)
 Frame = +3

Query: 6   MDDQFSMTTINHIQKGSGXXXXXXXXXXXXXXXXXXGIGMIEERLRITRFRDGNGNVSST 185
           ++DQFS TTINHI+KGS                   GI  IE RL+ITRFRDGNGN+S  
Sbjct: 130 LNDQFSKTTINHIEKGSVLLWVHFAFVVVVVFFVHFGISAIERRLKITRFRDGNGNLSDP 189

Query: 186 SGNDVAIFTIMVQGLPKTL 242
           + +  AIFTIMV+G+PKTL
Sbjct: 190 AADSTAIFTIMVEGIPKTL 208


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