BLASTX nr result

ID: Coptis23_contig00036794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036794
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556823.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...    78   8e-13
ref|XP_002313618.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_003545179.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...    74   2e-11
ref|XP_003530369.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...    72   4e-11
ref|XP_003518461.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...    71   1e-10

>ref|XP_003556823.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Glycine max]
          Length = 854

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/129 (30%), Positives = 71/129 (55%)
 Frame = +1

Query: 4   WKVTFNRGTLEGDCECKNFQFEGLLCAHILKLFQRYDIEEISNHFILKRWTQKANTYRAV 183
           + VT N   L+ +C C+ F++ G+LC HIL +F   ++  +  H+ILKRWT+ A     +
Sbjct: 527 YMVTLNHSELKANCSCQMFEYAGILCKHILTVFTVTNVLTLPPHYILKRWTRNAKNSAGL 586

Query: 184 FDGGVVAGHEDHEPLRVSHCIKVATKLAYDASISVETYAYFIQKMSEMSIRVSELKETIS 363
            +    +  ++    R  +  K A + A + S++VETY   I  + E   +V+ +K++++
Sbjct: 587 DEHTGESHAQESLTARYGNLCKEAIRYAEEGSVTVETYNAAISGLREGVKKVANVKKSVA 646

Query: 364 KTHTMNNEA 390
           K    NN+A
Sbjct: 647 KVTPPNNQA 655


>ref|XP_002313618.1| predicted protein [Populus trichocarpa] gi|222850026|gb|EEE87573.1|
           predicted protein [Populus trichocarpa]
          Length = 837

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/121 (30%), Positives = 68/121 (56%)
 Frame = +1

Query: 4   WKVTFNRGTLEGDCECKNFQFEGLLCAHILKLFQRYDIEEISNHFILKRWTQKANTYRAV 183
           + V+ N   +  +C C+ F++ G+LC H+L +F   ++  +  H+ILKRWT+ A T    
Sbjct: 524 YMVSLNYPEMRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPPHYILKRWTRNAKTGAGT 583

Query: 184 FDGGVVAGHEDHEPLRVSHCIKVATKLAYDASISVETYAYFIQKMSEMSIRVSELKETIS 363
            D GV    ++   LR ++  + A K A + +I+VETY   +  + E   +V+ +K+ ++
Sbjct: 584 DDRGVDLPGQESLTLRYNNLCREAIKYAEEGAIAVETYNAAMGALREGGKKVAAVKKNVA 643

Query: 364 K 366
           K
Sbjct: 644 K 644


>ref|XP_003545179.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Glycine max]
          Length = 849

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
 Frame = +1

Query: 1   IWKVTFNRGTLEGDCECKNFQFEGLLCAHILKLFQRYDIEEISNHFILKRWTQKANTYRA 180
           ++ VT N   L  +C C+ F++ G+LC H+L +F   ++  + +H+ILKRWT+ + +   
Sbjct: 521 VYIVTLNLSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNSKSSA- 579

Query: 181 VFDGGVVAGHEDHEP----LRVSHCIKVATKLAYDASISVETYAYFIQKMSEMSIRVSEL 348
              G V    E H P     R S+    A K A + +++VETY   I  + E   ++S +
Sbjct: 580 ---GSVELADESHGPKSLTSRYSNLCWEAIKYAEEGALTVETYDTAISALRESGKKISFM 636

Query: 349 KETISKTHTMNNEAPP 396
           + +++K       APP
Sbjct: 637 RRSVAKV------APP 646


>ref|XP_003530369.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Glycine max]
          Length = 855

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
 Frame = +1

Query: 4   WKVTFNRGTLEGDCECKNFQFEGLLCAHILKLFQRYDIEEISNHFILKRWTQKA----NT 171
           + VT N   ++ +C C+ F++ G+LC HIL +F   ++  + +H+ILKRWT  A     T
Sbjct: 545 YMVTLNISEMKANCSCQMFEYSGILCRHILTVFTVTNVLTLPSHYILKRWTTNAKSDIRT 604

Query: 172 YRAVFDGGVVAGHEDHEPLRVSHCIKVATKLAYDASISVETYAYFIQKMSEMSIRVSELK 351
           Y  + D   +    ++  +R +   + A KLA + +I+VETY   +  + E + RV  +K
Sbjct: 605 YEKITDPLDI----ENLTVRFNSLCREAIKLAEEGAIAVETYNATMNALREGAKRVGIMK 660

Query: 352 ETISKTHTMN 381
           + ++K    N
Sbjct: 661 KNVAKVTPPN 670


>ref|XP_003518461.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Glycine max]
          Length = 879

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
 Frame = +1

Query: 10  VTFNRGTLEGDCECKNFQFEGLLCAHILKLFQRYDIEEISNHFILKRWTQKANTYRAVFD 189
           VT N   L  +C C+ F++ G+LC H+L +F   ++  + +H+ILKRWT+ A +     +
Sbjct: 553 VTLNLSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSSAGSVE 612

Query: 190 -GGVVAGHEDHEPLRVSHCIKVATKLAYDASISVETYAYFIQKMSEMSIRVSELKETISK 366
             G   GHE     R S+    A K A + +++VE Y   I  + E   ++S ++ +++K
Sbjct: 613 LAGESLGHESLTS-RYSNLCWEAIKYAEEGALTVEIYDTAISALRESGKKISFMRRSVAK 671

Query: 367 THTMNNEAPP 396
                  APP
Sbjct: 672 V------APP 675


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