BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036781
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25399.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arab...   115   5e-24

>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/95 (78%), Positives = 87/95 (91%)
 Frame = -3

Query: 287 GRLNDAMEFINNMPIEPTDMIWQTLLAACRVHGNVELGEIAAKKILSVSPQYSATYVLLS 108
           GRL+DAMEFI  MP+EP +M+WQTLL  CRVHGNVELGEIAA+KILS+ P+YSATYVLLS
Sbjct: 624 GRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLS 683

Query: 107 NTYIEKGSVKNGLSLRNVMRDRGVKKEPGFSWISV 3
           NTYIE GS ++GLSLRNVM+D+GVKKEPG+SWISV
Sbjct: 684 NTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISV 718


>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/95 (78%), Positives = 87/95 (91%)
 Frame = -3

Query: 287 GRLNDAMEFINNMPIEPTDMIWQTLLAACRVHGNVELGEIAAKKILSVSPQYSATYVLLS 108
           GRL+DAMEFI  MP+EP +M+WQTLL  CRVHGNVELGEIAA+KILS+ P+YSATYVLLS
Sbjct: 678 GRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLS 737

Query: 107 NTYIEKGSVKNGLSLRNVMRDRGVKKEPGFSWISV 3
           NTYIE GS ++GLSLRNVM+D+GVKKEPG+SWISV
Sbjct: 738 NTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISV 772


>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/95 (75%), Positives = 84/95 (88%)
 Frame = -3

Query: 287 GRLNDAMEFINNMPIEPTDMIWQTLLAACRVHGNVELGEIAAKKILSVSPQYSATYVLLS 108
           G LNDAMEFI+ MP+EP +M+WQTLL ACRVHGNVELGE+AA+KILS   + SATYVLLS
Sbjct: 628 GHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLS 687

Query: 107 NTYIEKGSVKNGLSLRNVMRDRGVKKEPGFSWISV 3
           NTYIE GS K+GLSLR+VM+++GVKKEPG SWISV
Sbjct: 688 NTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISV 722


>ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/95 (74%), Positives = 84/95 (88%)
 Frame = -3

Query: 287 GRLNDAMEFINNMPIEPTDMIWQTLLAACRVHGNVELGEIAAKKILSVSPQYSATYVLLS 108
           G LNDAMEFI+ MP+EP +M+WQTLL ACRVHGNVELGE+AA+KILS   + SATYVLLS
Sbjct: 628 GHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLS 687

Query: 107 NTYIEKGSVKNGLSLRNVMRDRGVKKEPGFSWISV 3
           NTYIE GS K+GLSLR++M+++GVKKEPG SWISV
Sbjct: 688 NTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISV 722


>ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata] gi|297312278|gb|EFH42702.1| hypothetical protein
           ARALYDRAFT_919404 [Arabidopsis lyrata subsp. lyrata]
          Length = 749

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/95 (53%), Positives = 72/95 (75%)
 Frame = -3

Query: 287 GRLNDAMEFINNMPIEPTDMIWQTLLAACRVHGNVELGEIAAKKILSVSPQYSATYVLLS 108
           GRL +A +FI  MPIEP + +W TLL ACRVHGN++L +IAA+K+LS +P   A  VLLS
Sbjct: 619 GRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLS 678

Query: 107 NTYIEKGSVKNGLSLRNVMRDRGVKKEPGFSWISV 3
           NTY E G+++ GL++RN+M+ + ++KE G SWI +
Sbjct: 679 NTYREAGNIEGGLNVRNMMKSQAMRKETGMSWICI 713