BLASTX nr result

ID: Coptis23_contig00036774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036774
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515236.1| gibberellin 2-oxidase, putative [Ricinus com...   110   1e-22
ref|XP_003591361.1| Gibberellin 2-beta-dioxygenase [Medicago tru...   106   2e-21
ref|XP_002320960.1| gibberellin 2-oxidase [Populus trichocarpa] ...   105   3e-21
emb|CBI36990.3| unnamed protein product [Vitis vinifera]              104   7e-21
ref|XP_002272155.1| PREDICTED: gibberellin 2-beta-dioxygenase 2 ...   104   7e-21

>ref|XP_002515236.1| gibberellin 2-oxidase, putative [Ricinus communis]
           gi|223545716|gb|EEF47220.1| gibberellin 2-oxidase,
           putative [Ricinus communis]
          Length = 333

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/72 (69%), Positives = 56/72 (77%)
 Frame = +3

Query: 3   HRVLVNSFKSRMSMVYFGAPPLQAWISPLSELVTAQNPCLYRPFTWEEYKKTTYSLRLGD 182
           HR L NS KSRMSM+YFGAPPL  WISPL E+V+ QNP  Y+PFTW E+KK  YSLRLGD
Sbjct: 257 HRALANSNKSRMSMMYFGAPPLNTWISPLQEMVSPQNPTRYKPFTWGEFKKAAYSLRLGD 316

Query: 183 SRLDLFRTQGRD 218
           SRLDLF+    D
Sbjct: 317 SRLDLFKIHSTD 328


>ref|XP_003591361.1| Gibberellin 2-beta-dioxygenase [Medicago truncatula]
           gi|355480409|gb|AES61612.1| Gibberellin
           2-beta-dioxygenase [Medicago truncatula]
          Length = 345

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/73 (64%), Positives = 59/73 (80%)
 Frame = +3

Query: 3   HRVLVNSFKSRMSMVYFGAPPLQAWISPLSELVTAQNPCLYRPFTWEEYKKTTYSLRLGD 182
           HRVL N+ K RMSM+YF APPL  WISPLS++VTA NP LY+PFTW +YK+  Y+LRLGD
Sbjct: 265 HRVLTNTTKPRMSMMYFAAPPLNWWISPLSKMVTAHNPSLYKPFTWAQYKQAAYALRLGD 324

Query: 183 SRLDLFRTQGRDE 221
           SRLD F+ Q +++
Sbjct: 325 SRLDQFKLQKQED 337


>ref|XP_002320960.1| gibberellin 2-oxidase [Populus trichocarpa]
           gi|222861733|gb|EEE99275.1| gibberellin 2-oxidase
           [Populus trichocarpa]
          Length = 322

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = +3

Query: 3   HRVLVNSFKSRMSMVYFGAPPLQAWISPLSELVTAQNPCLYRPFTWEEYKKTTYSLRLGD 182
           HRVL NS + RMSM+YFGAPPL AWI+PLS +V+ QNP LY+PFTW E+KK  YSLRL D
Sbjct: 256 HRVLTNSSQPRMSMMYFGAPPLTAWIAPLSHMVSQQNPSLYKPFTWSEFKKAAYSLRLRD 315

Query: 183 SRLDLFR 203
           +RLDLF+
Sbjct: 316 TRLDLFK 322


>emb|CBI36990.3| unnamed protein product [Vitis vinifera]
          Length = 334

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/67 (68%), Positives = 55/67 (82%)
 Frame = +3

Query: 3   HRVLVNSFKSRMSMVYFGAPPLQAWISPLSELVTAQNPCLYRPFTWEEYKKTTYSLRLGD 182
           HR L +S K+R+SM+YFGAPPL AWISPL ++V+ Q P LYRPF+W EYKK  YSLRLGD
Sbjct: 255 HRALTSSVKARLSMMYFGAPPLNAWISPLPDMVSPQKPSLYRPFSWVEYKKAAYSLRLGD 314

Query: 183 SRLDLFR 203
            RLDLF+
Sbjct: 315 RRLDLFK 321


>ref|XP_002272155.1| PREDICTED: gibberellin 2-beta-dioxygenase 2 [Vitis vinifera]
           gi|147843548|emb|CAN79462.1| hypothetical protein
           VITISV_042495 [Vitis vinifera]
          Length = 333

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/67 (68%), Positives = 55/67 (82%)
 Frame = +3

Query: 3   HRVLVNSFKSRMSMVYFGAPPLQAWISPLSELVTAQNPCLYRPFTWEEYKKTTYSLRLGD 182
           HR L +S K+R+SM+YFGAPPL AWISPL ++V+ Q P LYRPF+W EYKK  YSLRLGD
Sbjct: 255 HRALTSSVKARLSMMYFGAPPLNAWISPLPDMVSPQKPSLYRPFSWVEYKKAAYSLRLGD 314

Query: 183 SRLDLFR 203
            RLDLF+
Sbjct: 315 RRLDLFK 321


Top