BLASTX nr result

ID: Coptis23_contig00036708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036708
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25411.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_002278231.1| PREDICTED: uncharacterized protein LOC100253...   194   8e-48
emb|CAN64033.1| hypothetical protein VITISV_028159 [Vitis vinifera]   192   2e-47
ref|XP_002311251.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|XP_004167177.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   185   3e-45

>emb|CBI25411.3| unnamed protein product [Vitis vinifera]
          Length = 588

 Score =  194 bits (492), Expect = 8e-48
 Identities = 99/150 (66%), Positives = 120/150 (80%), Gaps = 4/150 (2%)
 Frame = -2

Query: 471 LKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTALVYGSFLGTSANL 292
           +KLA VGFISSIGAVA+SN LY  R++LNPAL+ NQ+NKRSPI KTA VYG FLG SANL
Sbjct: 440 VKLASVGFISSIGAVAASNTLYAVRKILNPALIVNQQNKRSPIFKTAFVYGCFLGISANL 499

Query: 291 RYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVARYTGLQTRKSKV 112
           RYQIIAG+VEHR SD   +SQPLLVN+LSF  RT+NSYWGTQQW+D+AR+TGLQT+KS+ 
Sbjct: 500 RYQIIAGVVEHRFSDQ-FASQPLLVNMLSFFARTINSYWGTQQWVDLARFTGLQTQKSEP 558

Query: 111 TSDPPSETLNLSAL----TDEVSVDEMKNQ 34
            S    ++ N +AL     +E  +DE+KNQ
Sbjct: 559 PSYQTVDSSNHAALECSSAEETHIDEIKNQ 588


>ref|XP_002278231.1| PREDICTED: uncharacterized protein LOC100253544 [Vitis vinifera]
          Length = 749

 Score =  194 bits (492), Expect = 8e-48
 Identities = 99/150 (66%), Positives = 120/150 (80%), Gaps = 4/150 (2%)
 Frame = -2

Query: 471  LKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTALVYGSFLGTSANL 292
            +KLA VGFISSIGAVA+SN LY  R++LNPAL+ NQ+NKRSPI KTA VYG FLG SANL
Sbjct: 601  VKLASVGFISSIGAVAASNTLYAVRKILNPALIVNQQNKRSPIFKTAFVYGCFLGISANL 660

Query: 291  RYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVARYTGLQTRKSKV 112
            RYQIIAG+VEHR SD   +SQPLLVN+LSF  RT+NSYWGTQQW+D+AR+TGLQT+KS+ 
Sbjct: 661  RYQIIAGVVEHRFSDQ-FASQPLLVNMLSFFARTINSYWGTQQWVDLARFTGLQTQKSEP 719

Query: 111  TSDPPSETLNLSAL----TDEVSVDEMKNQ 34
             S    ++ N +AL     +E  +DE+KNQ
Sbjct: 720  PSYQTVDSSNHAALECSSAEETHIDEIKNQ 749


>emb|CAN64033.1| hypothetical protein VITISV_028159 [Vitis vinifera]
          Length = 749

 Score =  192 bits (488), Expect = 2e-47
 Identities = 99/150 (66%), Positives = 119/150 (79%), Gaps = 4/150 (2%)
 Frame = -2

Query: 471  LKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTALVYGSFLGTSANL 292
            +KLA VGFISSIGAVA+SN LY  R++LNPAL  NQ+NKRSPI KTA VYG FLG SANL
Sbjct: 601  VKLASVGFISSIGAVAASNTLYAVRKILNPALXVNQQNKRSPIFKTAFVYGCFLGISANL 660

Query: 291  RYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVARYTGLQTRKSKV 112
            RYQIIAG+VEHR SD   +SQPLLVN+LSF  RT+NSYWGTQQW+D+AR+TGLQT+KS+ 
Sbjct: 661  RYQIIAGVVEHRFSDQ-FASQPLLVNMLSFFARTINSYWGTQQWVDLARFTGLQTQKSEP 719

Query: 111  TSDPPSETLNLSAL----TDEVSVDEMKNQ 34
             S    ++ N +AL     +E  +DE+KNQ
Sbjct: 720  PSYQTVDSSNHAALECSSAEEAHIDEIKNQ 749


>ref|XP_002311251.1| predicted protein [Populus trichocarpa] gi|222851071|gb|EEE88618.1|
            predicted protein [Populus trichocarpa]
          Length = 726

 Score =  187 bits (474), Expect = 1e-45
 Identities = 95/150 (63%), Positives = 119/150 (79%), Gaps = 4/150 (2%)
 Frame = -2

Query: 471  LKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTALVYGSFLGTSANL 292
            +KL+ VGFISSIG VA+SN+LY  R+L+NPALV +Q+ KRSPILKTA +YG FLGTSANL
Sbjct: 578  VKLSSVGFISSIGTVAASNLLYAIRKLINPALVTDQRTKRSPILKTAAIYGCFLGTSANL 637

Query: 291  RYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVARYTGLQTRKSK- 115
            RYQIIAG+VEHRISD   SSQ LLVN+LSF VRT+NSYWGTQQW+D+AR++GLQ++KS+ 
Sbjct: 638  RYQIIAGIVEHRISDE-FSSQTLLVNMLSFIVRTINSYWGTQQWVDLARFSGLQSQKSEP 696

Query: 114  ---VTSDPPSETLNLSALTDEVSVDEMKNQ 34
                T D PS         ++ ++DE+ NQ
Sbjct: 697  PSYQTLDSPSNAAIGCNTLEDTNIDEINNQ 726


>ref|XP_004167177.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230293
            [Cucumis sativus]
          Length = 756

 Score =  185 bits (470), Expect = 3e-45
 Identities = 100/151 (66%), Positives = 117/151 (77%), Gaps = 5/151 (3%)
 Frame = -2

Query: 471  LKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTALVYGSFLGTSANL 292
            LKLA VGFISSIGAVASSN L+  R+ LNPAL   Q+NKRSPILKTA VYG FLGTSANL
Sbjct: 607  LKLASVGFISSIGAVASSNALFTIRKFLNPALANKQRNKRSPILKTAAVYGCFLGTSANL 666

Query: 291  RYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVARYTGLQTRKS-- 118
            RYQIIAG+VEHR SD   SSQ LLVN+LSF VRT+NSYWGTQQWID+AR+TGLQTR+S  
Sbjct: 667  RYQIIAGIVEHRFSD-AFSSQILLVNMLSFVVRTLNSYWGTQQWIDLARFTGLQTRESPS 725

Query: 117  ---KVTSDPPSETLNLSALTDEVSVDEMKNQ 34
               + + +P +   +++    + S DE KNQ
Sbjct: 726  YQVQESPNPAALGCHVTEEATQTSPDEFKNQ 756


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