BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036681
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38862.3| unnamed protein product [Vitis vinifera]              305   5e-81
ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi...   305   5e-81
ref|XP_003623723.1| Pentatricopeptide repeat-containing protein ...   276   2e-72
ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|2...   276   2e-72
gb|AFK47264.1| unknown [Lotus japonicus]                              271   8e-71

>emb|CBI38862.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  305 bits (781), Expect = 5e-81
 Identities = 154/217 (70%), Positives = 182/217 (83%)
 Frame = +3

Query: 3   EAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKPRRADWLLVL 182
           EAQ+  ISQ+  KM+KR KA +KQIICF   E++   LS +L +WVKIMKPRRADWL VL
Sbjct: 20  EAQKMTISQISLKMTKRCKALVKQIICFSPEERS---LSDLLAAWVKIMKPRRADWLSVL 76

Query: 183 KEMSKLEVPLVFEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITLQAMKKRGFT 362
           KE+ +L+ PL+ EV E ALLE+SFEANIRDYTK+IDGY KQNRL DAE TL AMK+RGF 
Sbjct: 77  KELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTLSAMKRRGFI 136

Query: 363 CDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRAGMPDRGEIL 542
           CDQ+TLT +INMYSKAG+LE AE+ FEE+KLLG PLDKR+YG+MIMAY+RAGMPD+GEIL
Sbjct: 137 CDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRAGMPDQGEIL 196

Query: 543 LGEMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFD 653
           + EMEA+EIYAG+EVYKALLRAYS   +  GAQRVFD
Sbjct: 197 VKEMEAKEIYAGREVYKALLRAYSNTSDAEGAQRVFD 233


>ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Vitis vinifera]
          Length = 352

 Score =  305 bits (781), Expect = 5e-81
 Identities = 154/217 (70%), Positives = 182/217 (83%)
 Frame = +3

Query: 3   EAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKPRRADWLLVL 182
           EAQ+  ISQ+  KM+KR KA +KQIICF   E++   LS +L +WVKIMKPRRADWL VL
Sbjct: 20  EAQKMTISQISLKMTKRCKALVKQIICFSPEERS---LSDLLAAWVKIMKPRRADWLSVL 76

Query: 183 KEMSKLEVPLVFEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITLQAMKKRGFT 362
           KE+ +L+ PL+ EV E ALLE+SFEANIRDYTK+IDGY KQNRL DAE TL AMK+RGF 
Sbjct: 77  KELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTLSAMKRRGFI 136

Query: 363 CDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRAGMPDRGEIL 542
           CDQ+TLT +INMYSKAG+LE AE+ FEE+KLLG PLDKR+YG+MIMAY+RAGMPD+GEIL
Sbjct: 137 CDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRAGMPDQGEIL 196

Query: 543 LGEMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFD 653
           + EMEA+EIYAG+EVYKALLRAYS   +  GAQRVFD
Sbjct: 197 VKEMEAKEIYAGREVYKALLRAYSNTSDAEGAQRVFD 233


>ref|XP_003623723.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498738|gb|AES79941.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  276 bits (707), Expect = 2e-72
 Identities = 139/217 (64%), Positives = 175/217 (80%)
 Frame = +3

Query: 3   EAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKPRRADWLLVL 182
           E Q++AI++LP +M KR KA M+QIICF  SE+ G  L  +LR+WV+IMKP RADWL VL
Sbjct: 97  EEQKQAIAKLPFRMEKRCKAVMRQIICF--SEEKG-RLCDVLRAWVEIMKPTRADWLSVL 153

Query: 183 KEMSKLEVPLVFEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITLQAMKKRGFT 362
           KE+  ++ PL  EV E+AL+E+SFE N+RDYTKLI  Y+K+N+L  AE     MK+RGF 
Sbjct: 154 KELKNMDHPLYLEVAEHALVEESFEPNLRDYTKLIHYYSKENQLEAAENIFTLMKQRGFI 213

Query: 363 CDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRAGMPDRGEIL 542
           CDQ+ LT +++MYSKAG L++AEE FEE+KLLG PLDKR+YG+MIMAY+RAGMP++GE L
Sbjct: 214 CDQVILTTMVHMYSKAGHLDRAEEYFEEIKLLGEPLDKRSYGSMIMAYIRAGMPEKGESL 273

Query: 543 LGEMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFD 653
           L EM+AQ+IYAG EVYKALLRAYS +GN  GAQRVFD
Sbjct: 274 LEEMDAQDIYAGSEVYKALLRAYSVIGNAEGAQRVFD 310


>ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|222861503|gb|EEE99045.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  276 bits (706), Expect = 2e-72
 Identities = 141/217 (64%), Positives = 176/217 (81%)
 Frame = +3

Query: 3   EAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKPRRADWLLVL 182
           E Q++AISQLP KM+KR KA M+QIICF+  +K G +L  +L +WVKIMKPRR DWL +L
Sbjct: 84  EEQKQAISQLPFKMTKRCKALMRQIICFN--DKKG-SLRGLLSAWVKIMKPRRKDWLSIL 140

Query: 183 KEMSKLEVPLVFEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITLQAMKKRGFT 362
           KE++K+E PL  EV E ALLE+SFEAN+RDYTK+I  Y   N+L +AE T  AM++RGF 
Sbjct: 141 KELNKMEHPLYLEVVEIALLEESFEANVRDYTKIIHFYGMNNQLEEAERTRLAMEERGFV 200

Query: 363 CDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRAGMPDRGEIL 542
            DQ+TLT +I+MYSK G+L  AEE FEELKLLG PLD+R+YG+MIMAY+RAGMP++GE++
Sbjct: 201 SDQVTLTAMIHMYSKGGNLTLAEETFEELKLLGQPLDRRSYGSMIMAYIRAGMPEKGEMI 260

Query: 543 LGEMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFD 653
           L EM+AQEI AG EVYKALLRAYS +G+  GAQRVFD
Sbjct: 261 LREMDAQEIRAGSEVYKALLRAYSIIGDADGAQRVFD 297


>gb|AFK47264.1| unknown [Lotus japonicus]
          Length = 414

 Score =  271 bits (693), Expect = 8e-71
 Identities = 137/215 (63%), Positives = 170/215 (79%)
 Frame = +3

Query: 9   QEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKPRRADWLLVLKE 188
           Q +AIS+LP KM+KR KA M+QIICF   + N   +S +L +WVKIMKP RA+WL VLKE
Sbjct: 89  QNEAISKLPFKMTKRCKALMRQIICFSAEKGN---VSDLLNAWVKIMKPIRAEWLSVLKE 145

Query: 189 MSKLEVPLVFEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITLQAMKKRGFTCD 368
           +  +E PL  EV E+ALLE+SFE NIRDYT +I    K N+L +AE  L AMK+RGF CD
Sbjct: 146 LETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICD 205

Query: 369 QITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRAGMPDRGEILLG 548
           Q+ LT ++++YSKAG L++AEE FEE++LLG PLDKR+YG+MI AY+RAGMP+RGE LL 
Sbjct: 206 QVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLE 265

Query: 549 EMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFD 653
           EM+A+EIYAG EVYKALLRAYS +GN  GAQRVFD
Sbjct: 266 EMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFD 300