BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036678
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB88749.1| integrase [Silene latifolia]                           70   2e-10
emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera]    70   2e-10
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]    69   3e-10
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]    69   3e-10
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                  68   7e-10

>dbj|BAB88749.1| integrase [Silene latifolia]
          Length = 282

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
 Frame = -2

Query: 365 KESHFQWTEAAQK*FDALKKRIVKAPVLARIF*SSLKWIRMDASGLAIRA---EEGKPIA 195
           K+  F WTE+AQ+ F+ +KK + + P+L       L  +  DASG+ I A   +  KP+A
Sbjct: 67  KKGEFHWTESAQQSFERIKKLMCETPILKLPDFDQLFEVECDASGVGIGAVLIQAQKPVA 126

Query: 194 FFSDKLNEARXXXXXXXXXKRCMH*CLKHWRHNFRRN----LSCTRARRFLQTQDKLGAR 27
           +FS+KLN A+            +   + HW H  +       S   A +++  Q KL  R
Sbjct: 127 YFSEKLNGAKLKYSTYDKEFYAIIRAVMHWSHYLKPKPFVLHSDHEALKYINGQHKLSHR 186

Query: 26  HVRWVAYL 3
           H +WV YL
Sbjct: 187 HAKWVEYL 194


>emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera]
          Length = 551

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
 Frame = -2

Query: 365 KESHFQWTEAAQK*FDALKKRIVKAPVLARIF*SSLKWIRMDASGLAI---RAEEGKPIA 195
           K++ F WT+AA K F+ +KKR+ +APVL     S +  +  +AS + I    ++EG PIA
Sbjct: 228 KKNQFVWTKAATKAFEEVKKRLTEAPVLQLPXFSKVFEVACNASNVGIGGMLSQEGHPIA 287

Query: 194 FFSDKLNEARXXXXXXXXXKRCMH*CLKHWRHNFRRNLSCTRARRF-LQTQDKLGARHVR 18
           FFS KLNEA+            +   L++WRH           + F + +Q KL  RH +
Sbjct: 288 FFSXKLNEAKQKYSIYDKEFYAVVQTLRYWRH-------FLLPQEFNVNSQKKLNHRHGK 340

Query: 17  WVAYL 3
           WV++L
Sbjct: 341 WVSFL 345


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
 Frame = -2

Query: 365  KESHFQWTEAAQK*FDALKKRIVKAPVLARIF*SSLKWIRMDASGLAIRA---EEGKPIA 195
            K   F WT+AA K F+ +K ++V  P+L       +  +  DAS + I A   +EG P+A
Sbjct: 882  KPGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVA 941

Query: 194  FFSDKLNEARXXXXXXXXXKRCMH*CLKHWRHNFRRN----LSCTRARRFLQTQDKLGAR 27
            FFS+KLN A+            +   ++HW+H          S   A R+L +Q KL +R
Sbjct: 942  FFSEKLNGAKKKYSTYDLEFYAVVQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSR 1001

Query: 26   HVRWVAYL 3
            H +W ++L
Sbjct: 1002 HAKWSSFL 1009


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
 Frame = -2

Query: 365  KESHFQWTEAAQK*FDALKKRIVKAPVLARIF*SSLKWIRMDASGLAIRA---EEGKPIA 195
            K   F WT+AA K F+ +K ++V  P+L       +  +  DAS + I A   +EG P+A
Sbjct: 807  KPGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVA 866

Query: 194  FFSDKLNEARXXXXXXXXXKRCMH*CLKHWRHNFRRN----LSCTRARRFLQTQDKLGAR 27
            FFS+KLN A+            +   ++HW+H          S   A R+L +Q KL +R
Sbjct: 867  FFSEKLNGAKKKYSTYDLEFYAVVQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSR 926

Query: 26   HVRWVAYL 3
            H +W ++L
Sbjct: 927  HAKWSSFL 934


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
 Frame = -2

Query: 365  KESHFQWTEAAQK*FDALKKRIVKAPVLARIF*SSLKWIRMDASGLAIRA---EEGKPIA 195
            ++  FQWTE AQ+ F+ +K+ +   P+L       L  +  DASG+ I A   +  KP+A
Sbjct: 875  RKGEFQWTEQAQQSFEKIKQLMCNTPILKLPDFDQLFEVECDASGVGIGAVLIQSQKPVA 934

Query: 194  FFSDKLNEARXXXXXXXXXKRCMH*CLKHWRHNFRRN----LSCTRARRFLQTQDKLGAR 27
            +FS+KLN A+            +   L HW H  +       S   A +++  Q KL  R
Sbjct: 935  YFSEKLNGAKLKYSTYDKEFYAIIRALMHWNHYLKPKPFVLHSDHEALKYINGQHKLNFR 994

Query: 26   HVRWVAYL 3
            H +WV +L
Sbjct: 995  HAKWVEFL 1002