BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036674
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV43830.1| hypothetical protein [Oryza sativa Japonica Group...    52   1e-06
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    52   2e-06
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]         52   2e-06
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    53   3e-06
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    53   3e-06

>gb|AAV43830.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|55168038|gb|AAV43906.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 697

 Score = 52.0 bits (123), Expect(2) = 1e-06
 Identities = 25/76 (32%), Positives = 41/76 (53%)
 Frame = +1

Query: 85  WKLMKENNSLWSNFFKGIFRKSWLHKDMYNLPPNFSYLWKGICKHLHVVQNNIMWSIGDG 264
           W+L+ E NSL +   K  +  +    D    P N S  WKGI   L +++  ++W IGD 
Sbjct: 305 WRLIAEPNSLCARLLKAKYYPNGSLTDTA-FPSNTSPTWKGIEHGLELLKKGLIWRIGDR 363

Query: 265 SSISLFSNHWLSHGDK 312
            +  ++ N W++HG+K
Sbjct: 364 RTTKIWRNRWVAHGEK 379



 Score = 25.0 bits (53), Expect(2) = 1e-06
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 9   PKKMGGLCFRKSKNMNSTHIAIKTW 83
           PK  GGL FR +++ N   +A + W
Sbjct: 281 PKLHGGLGFRDTRSFNQALLARQAW 305


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 52.4 bits (124), Expect(2) = 2e-06
 Identities = 24/75 (32%), Positives = 41/75 (54%)
 Frame = +1

Query: 85   WKLMKENNSLWSNFFKGIFRKSWLHKDMYNLPPNFSYLWKGICKHLHVVQNNIMWSIGDG 264
            W+L++  +SL +   K  +  +    D    P   S  WKGI   L +++  ++W IGDG
Sbjct: 1123 WRLIESPDSLCARVLKAKYYPNGTITDTA-FPSVSSPTWKGIVHGLELLKKGLIWRIGDG 1181

Query: 265  SSISLFSNHWLSHGD 309
            S   ++ NHW++HG+
Sbjct: 1182 SKTKIWRNHWVAHGE 1196



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 9    PKKMGGLCFRKSKNMNSTHIAIKTW 83
            PK +GGL FR  +  N   +A + W
Sbjct: 1099 PKLLGGLGFRDIRCFNQALLARQAW 1123


>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
          Length = 1205

 Score = 52.4 bits (124), Expect(2) = 2e-06
 Identities = 24/75 (32%), Positives = 41/75 (54%)
 Frame = +1

Query: 85   WKLMKENNSLWSNFFKGIFRKSWLHKDMYNLPPNFSYLWKGICKHLHVVQNNIMWSIGDG 264
            W+L++  +SL +   K  +  +    D    P   S  WKGI   L +++  ++W IGDG
Sbjct: 859  WRLIESPDSLCARVLKAKYYPNGTITDTA-FPSVSSPTWKGIVHGLELLKKGLIWRIGDG 917

Query: 265  SSISLFSNHWLSHGD 309
            S   ++ NHW++HG+
Sbjct: 918  SKTKIWRNHWVAHGE 932



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 9   PKKMGGLCFRKSKNMNSTHIAIKTW 83
           PK +GGL FR  +  N   +A + W
Sbjct: 835 PKLLGGLGFRDIRCFNQALLARQAW 859


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 52.8 bits (125), Expect(2) = 3e-06
 Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = +1

Query: 82   GWKLMKENNSLWSNFFKGIFRKSWLHKDMYN--LPPNFSYLWKGICKHLHVVQNNIMWSI 255
            GW+L+++ +SL S   +    K +   D +      N SY W+ I K L V+QN ++W +
Sbjct: 1126 GWRLIQDPDSLCSRVLRA---KYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRV 1182

Query: 256  GDGSSISLFSNHWLSHG 306
            GDGS I+++++ W+  G
Sbjct: 1183 GDGSKINIWADPWIPRG 1199



 Score = 23.1 bits (48), Expect(2) = 3e-06
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 9    PKKMGGLCFRKSKNMNSTHIAIKTW 83
            PK MGGL FR     N   +A + W
Sbjct: 1103 PKNMGGLGFRDIYIFNLAMLAKQGW 1127


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 52.8 bits (125), Expect(2) = 3e-06
 Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = +1

Query: 82   GWKLMKENNSLWSNFFKGIFRKSWLHKDMYN--LPPNFSYLWKGICKHLHVVQNNIMWSI 255
            GW+L+++ +SL S   +    K +   D +      N SY W+ I K L V+QN ++W +
Sbjct: 1071 GWRLIQDPDSLCSRVLRA---KYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRV 1127

Query: 256  GDGSSISLFSNHWLSHG 306
            GDGS I+++++ W+  G
Sbjct: 1128 GDGSKINIWADPWIPRG 1144



 Score = 23.1 bits (48), Expect(2) = 3e-06
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 9    PKKMGGLCFRKSKNMNSTHIAIKTW 83
            PK MGGL FR     N   +A + W
Sbjct: 1048 PKNMGGLGFRDIYIFNLAMLAKQGW 1072