BLASTX nr result

ID: Coptis23_contig00036619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036619
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272617.2| PREDICTED: probable receptor-like protein ki...    89   5e-16
emb|CBI36481.3| unnamed protein product [Vitis vinifera]               89   5e-16
emb|CAN79180.1| hypothetical protein VITISV_019748 [Vitis vinifera]    89   5e-16
ref|XP_002527325.1| Serine/threonine-protein kinase PBS1, putati...    89   7e-16
ref|XP_004135868.1| PREDICTED: probable receptor-like protein ki...    82   9e-14

>ref|XP_002272617.2| PREDICTED: probable receptor-like protein kinase At1g80640-like
           [Vitis vinifera]
          Length = 446

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 64/143 (44%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
 Frame = +3

Query: 225 TMFSSVTHIGARPDPLSLQLSSISAAPILSPQTQQPPLSATMYAVSPGVKEQVKNSNSHH 404
           T+FS   H  ARPDPL   +S+I    + S       +SA + AVSPG+ E V+  +   
Sbjct: 18  TLFSLPVH--ARPDPL---VSTIYNPLLPSHYPPISQISAQLEAVSPGMPE-VRVVHHQD 71

Query: 405 LNKRMLIALVLVSSALFVILSFLVCFWICRSKNSRKS---DSIRSDGGRGISLAPILDKF 575
           +NKR+LIALV+ S+ L  IL FL CFWI R +N R S        D  +G+SL PIL KF
Sbjct: 72  VNKRILIALVVASTLLGGILLFLSCFWIQRQRNLRNSGRKSQQNLDAAKGLSLGPILGKF 131

Query: 576 NSMRMIGNSISRKGSVSMIEYSL 644
           NS+R  G    +K SV++IEY L
Sbjct: 132 NSLRANG----KKDSVTVIEYHL 150


>emb|CBI36481.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 64/143 (44%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
 Frame = +3

Query: 225 TMFSSVTHIGARPDPLSLQLSSISAAPILSPQTQQPPLSATMYAVSPGVKEQVKNSNSHH 404
           T+FS   H  ARPDPL   +S+I    + S       +SA + AVSPG+ E V+  +   
Sbjct: 18  TLFSLPVH--ARPDPL---VSTIYNPLLPSHYPPISQISAQLEAVSPGMPE-VRVVHHQD 71

Query: 405 LNKRMLIALVLVSSALFVILSFLVCFWICRSKNSRKS---DSIRSDGGRGISLAPILDKF 575
           +NKR+LIALV+ S+ L  IL FL CFWI R +N R S        D  +G+SL PIL KF
Sbjct: 72  VNKRILIALVVASTLLGGILLFLSCFWIQRQRNLRNSGRKSQQNLDAAKGLSLGPILGKF 131

Query: 576 NSMRMIGNSISRKGSVSMIEYSL 644
           NS+R  G    +K SV++IEY L
Sbjct: 132 NSLRANG----KKDSVTVIEYHL 150


>emb|CAN79180.1| hypothetical protein VITISV_019748 [Vitis vinifera]
          Length = 453

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 64/143 (44%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
 Frame = +3

Query: 225 TMFSSVTHIGARPDPLSLQLSSISAAPILSPQTQQPPLSATMYAVSPGVKEQVKNSNSHH 404
           T+FS   H  ARPDPL   +S+I    + S       +SA + AVSPG+ E V+  +   
Sbjct: 18  TLFSLPVH--ARPDPL---VSTIYNPLLPSHYPPISQISAQLEAVSPGMPE-VRVVHHQD 71

Query: 405 LNKRMLIALVLVSSALFVILSFLVCFWICRSKNSRKS---DSIRSDGGRGISLAPILDKF 575
           +NKR+LIALV+ S+ L  IL FL CFWI R +N R S        D  +G+SL PIL KF
Sbjct: 72  VNKRILIALVVASTLLGGILLFLSCFWIQRQRNLRNSGRKSQQNLDAAKGLSLGPILGKF 131

Query: 576 NSMRMIGNSISRKGSVSMIEYSL 644
           NS+R  G    +K SV++IEY L
Sbjct: 132 NSLRANG----KKDSVTVIEYHL 150


>ref|XP_002527325.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223533325|gb|EEF35077.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 397

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 52/104 (50%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
 Frame = +3

Query: 348 MYAVSPGVKEQVKNSNSHH--LNKRMLIALVLVSSALFVILSFLVCFWICRSKNSRKSDS 521
           M A SPG+      +  HH  LNKR+LIAL++ SS L  IL FL CFWI R K+S+KS +
Sbjct: 1   MEAQSPGITMAPVVTVVHHQDLNKRILIALIIASSLLGGILLFLSCFWIYRMKSSKKSST 60

Query: 522 IRS---DGGRGISLAPILDKFNSMRMIGNSISRKGSVSMIEYSL 644
                 D G G +L+PILDKFNS+RM+G    +KGS++++EY L
Sbjct: 61  KNKQNLDAGNGHTLSPILDKFNSLRMVG----KKGSIAVMEYQL 100


>ref|XP_004135868.1| PREDICTED: probable receptor-like protein kinase At1g80640-like
           [Cucumis sativus] gi|449533246|ref|XP_004173587.1|
           PREDICTED: probable receptor-like protein kinase
           At1g80640-like [Cucumis sativus]
          Length = 441

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
 Frame = +3

Query: 231 FSSVTHIGARPDPLSLQLSSISAAPILSPQTQQPPLSATMYAVSPGVKEQVKNSNSHHLN 410
           +S  + I ARPD     +SS   A    P +    + A M A SPGV E VK  +   LN
Sbjct: 5   YSLFSIIDARPDLPGFSISSTVFASHSQPISL---IVAKMEAQSPGVSE-VKVVHHQDLN 60

Query: 411 KRMLIALVLVSSALFVILSFLVCFWICRSKNSRKSD---SIRSDGGRGISLAPILDKFNS 581
           KR+LIAL++ S+ L  IL FL+CFWI R K S   D       +  +G +L PI+ +FNS
Sbjct: 61  KRILIALIISSTLLGAILLFLLCFWIYRRKTSNNDDGKCQKNLEASKGTALNPIISRFNS 120

Query: 582 MRMIGNSISRKGSVSMIEYSL 644
           +R+     + KGSVS I+Y L
Sbjct: 121 LRL----ANFKGSVSTIDYKL 137


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