BLASTX nr result

ID: Coptis23_contig00036598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036598
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   272   3e-71
ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   266   1e-69
emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]   266   1e-69
ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|2...   255   3e-66
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   249   2e-64

>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
           gi|223537142|gb|EEF38775.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  272 bits (695), Expect = 3e-71
 Identities = 124/197 (62%), Positives = 155/197 (78%), Gaps = 5/197 (2%)
 Frame = -2

Query: 576 LPSWPQGEGFGSGSINLGGLEVCQVSTFSKIWATSEGGPDNHGATFFEPSPLPAGFFMLG 397
           LP WP GEGFG+G+I+LGGL+VCQ+S+ +K+W+T EGGPDN GA+FFEPS +P GFFMLG
Sbjct: 29  LPKWPPGEGFGNGTIDLGGLQVCQISSLNKVWSTQEGGPDNVGASFFEPSQIPQGFFMLG 88

Query: 396 CYTQPNNRPLFGWVLSAKDDGKSFPSTLEMPVDYTLVWTSEGTNIKQDGNGYIWLPIPPN 217
           CY Q N+RPL+GWVL+ KDD       LE P+DYTLVW+SE   IKQD  GYIWLP  P+
Sbjct: 89  CYCQSNSRPLYGWVLAGKDDA---GGALEKPIDYTLVWSSESLKIKQDSIGYIWLPTAPD 145

Query: 216 GYKAVGLVVTNSSVKPPLDKIRCVRLDLTDESQQYEWIW-----SNTNGINIYSLKPTII 52
           GY+AVGLVVT+S  KP LDK+RCVR DLTD+ ++  W+W     S+ NG N++SL+P+  
Sbjct: 146 GYRAVGLVVTSSPEKPSLDKMRCVRSDLTDQCEKDIWVWGPEKQSDPNGFNVFSLRPSNR 205

Query: 51  GTQALGVCVGTFIAQVG 1
           GTQA+GVCVGTF+AQ G
Sbjct: 206 GTQAMGVCVGTFVAQNG 222


>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  266 bits (681), Expect = 1e-69
 Identities = 125/199 (62%), Positives = 150/199 (75%), Gaps = 7/199 (3%)
 Frame = -2

Query: 576 LPSWPQGEGFGSGSINLGG-LEVCQVSTFSKIWATSEGGPDNHGATFFEPSPLPAGFFML 400
           +P+WP GEGF  G+I+LGG LEVCQ+S+F+K+WAT EGGPDN GATFFEPSP+P  F ML
Sbjct: 32  MPTWPPGEGFAGGTIDLGGGLEVCQISSFTKVWATHEGGPDNLGATFFEPSPMPEEFCML 91

Query: 399 GCYTQPNNRPLFGWVLSAKDD-GKSFPSTLEMPVDYTLVWTSEGTNIKQDGNGYIWLPIP 223
           GCY+QPN +PLFGWVL+ KD+        L+ P+DYTLVW+SE   IKQDGNGY+WLP P
Sbjct: 92  GCYSQPNKKPLFGWVLAGKDNTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTP 151

Query: 222 PNGYKAVGLVVTNSSVKPPLDKIRCVRLDLTDESQQYEWIW-----SNTNGINIYSLKPT 58
           P+GYKAVG V+TN   KP LDKIRCVR DLTD  +   WIW     +N NG N+Y L+P+
Sbjct: 152 PDGYKAVGHVITNLPEKPSLDKIRCVRSDLTDLCEADTWIWGLDKVANANGFNVYDLQPS 211

Query: 57  IIGTQALGVCVGTFIAQVG 1
             G QAL V VGTF+AQ G
Sbjct: 212 DRGAQALAVSVGTFVAQNG 230


>emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]
          Length = 913

 Score =  266 bits (681), Expect = 1e-69
 Identities = 125/199 (62%), Positives = 150/199 (75%), Gaps = 7/199 (3%)
 Frame = -2

Query: 576 LPSWPQGEGFGSGSINLGG-LEVCQVSTFSKIWATSEGGPDNHGATFFEPSPLPAGFFML 400
           +P+WP GEGF  G+I+LGG LEVCQ+S+F+K+WAT EGGPDN GATFFEPSP+P  F ML
Sbjct: 1   MPTWPPGEGFAGGTIDLGGGLEVCQISSFTKVWATHEGGPDNLGATFFEPSPMPEEFCML 60

Query: 399 GCYTQPNNRPLFGWVLSAKDD-GKSFPSTLEMPVDYTLVWTSEGTNIKQDGNGYIWLPIP 223
           GCY+QPN +PLFGWVL+ KD+        L+ P+DYTLVW+SE   IKQDGNGY+WLP P
Sbjct: 61  GCYSQPNKKPLFGWVLAGKDNTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTP 120

Query: 222 PNGYKAVGLVVTNSSVKPPLDKIRCVRLDLTDESQQYEWIW-----SNTNGINIYSLKPT 58
           P+GYKAVG V+TN   KP LDKIRCVR DLTD  +   WIW     +N NG N+Y L+P+
Sbjct: 121 PDGYKAVGHVITNLPEKPSLDKIRCVRSDLTDLCEADTWIWGLDKVANANGFNVYDLQPS 180

Query: 57  IIGTQALGVCVGTFIAQVG 1
             G QAL V VGTF+AQ G
Sbjct: 181 DRGAQALAVSVGTFVAQNG 199


>ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|222866459|gb|EEF03590.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  255 bits (652), Expect = 3e-66
 Identities = 126/196 (64%), Positives = 150/196 (76%), Gaps = 6/196 (3%)
 Frame = -2

Query: 576 LPSWPQGEGFGSGSINLG-GLEVCQVSTFSKIWATSEGGPDNHGATFFEPSPLPAGFFML 400
           LPS PQGEGFG+G INLG GL+VCQV + +KIWAT+EGGPDN GATFFEPS +P GF ML
Sbjct: 24  LPSLPQGEGFGNGIINLGSGLQVCQVVSLNKIWATNEGGPDNLGATFFEPSQMPQGFSML 83

Query: 399 GCYTQPNNRPLFGWVLSAKDDGKSFPSTLEMPVDYTLVWTSEGTNIKQDGNGYIWLPIPP 220
           GCY+QPNNR L GWVL+ KD+       L  PVDYTLVW+SE   IKQ+G GYIWLP P 
Sbjct: 84  GCYSQPNNRMLHGWVLAGKDE---TGEALTKPVDYTLVWSSESLQIKQEGVGYIWLPTPL 140

Query: 219 NGYKAVGLVVTNSSVKPPLDKIRCVRLDLTDESQQYEWIW-----SNTNGINIYSLKPTI 55
           +GYKA+G VVT S  KP L+K+RCVR DLTD+ Q  +WIW     S+ NG N++SL+P+ 
Sbjct: 141 DGYKALGCVVTTSPEKPSLEKVRCVRSDLTDDCQIDKWIWGQGKESDPNGFNVFSLRPSN 200

Query: 54  IGTQALGVCVGTFIAQ 7
            GTQA+GV VGTF+AQ
Sbjct: 201 RGTQAMGVSVGTFVAQ 216


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  249 bits (637), Expect = 2e-64
 Identities = 119/188 (63%), Positives = 147/188 (78%), Gaps = 6/188 (3%)
 Frame = -2

Query: 552 GFGSGSINLG-GLEVCQVSTFSKIWATSEGGPDNHGATFFEPSPLPAGFFMLGCYTQPNN 376
           GFGSG I+LG GL+VCQ+S+F+K+WAT EGGPD+ GA+FFEPS LP GF MLGCY+QPNN
Sbjct: 73  GFGSGIIDLGDGLQVCQISSFNKVWATHEGGPDDLGASFFEPSQLPQGFSMLGCYSQPNN 132

Query: 375 RPLFGWVLSAKDDGKSFPSTLEMPVDYTLVWTSEGTNIKQDGNGYIWLPIPPNGYKAVGL 196
           R L+GWVL+ +D+  S    L+ P+DYTLVW+SE   IKQDG GYIWLP PP+GYKA+G 
Sbjct: 133 RSLYGWVLAGRDETGS---ALKQPIDYTLVWSSESLQIKQDGVGYIWLPTPPDGYKALGH 189

Query: 195 VVTNSSVKPPLDKIRCVRLDLTDESQQYEWIW-----SNTNGINIYSLKPTIIGTQALGV 31
           VVT S  KPPL KIRCVR DLT++ +   W+W     S+ NG N++SL P+  GTQA+GV
Sbjct: 190 VVTKSPQKPPLGKIRCVRSDLTEQCEFDSWVWGLGKESDLNGFNVFSLFPSNRGTQAMGV 249

Query: 30  CVGTFIAQ 7
           CVGTF+AQ
Sbjct: 250 CVGTFVAQ 257


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