BLASTX nr result

ID: Coptis23_contig00036586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036586
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    55   5e-06

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
 Frame = -2

Query: 332 IPW-IWSKLETGVYKLNTDGAVSELRWGTGGVVRDTNGEVIFGFTGSGGLKSVLF*ELNA 156
           I W IW K + G  KLNTDG+V     G GG++RD  G  I  F     L  +   EL A
Sbjct: 269 IRWCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWA 328

Query: 155 RLEG---CRGAQLDNVTVPSNSLSAIRILKEKREHLG 54
              G     G  +  + V S+S+SA++ +   + H G
Sbjct: 329 IWRGLVLALGLGIKVIWVESDSMSAVKTINRVQSHSG 365


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