BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036580
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80038.1| hypothetical protein VITISV_040550 [Vitis vinifera]    63   2e-08
emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]    62   4e-08
gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]               62   6e-08
emb|CAN77578.1| hypothetical protein VITISV_015344 [Vitis vinifera]    62   6e-08
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    60   1e-07

>emb|CAN80038.1| hypothetical protein VITISV_040550 [Vitis vinifera]
          Length = 869

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/70 (37%), Positives = 48/70 (68%)
 Frame = -1

Query: 212 VWAAICSIGCDRSPGPDGFLVEFYRKCWEIIRVDFMNMVVVDFNRSGFLAHTLNNSFVTL 33
           ++AA+  +  D++PGPDGF V F+++CWEI++ D ++M   +F+       +LN++F+ L
Sbjct: 195 IYAALMGMNGDKAPGPDGFTVAFWQRCWEIVKKDVLDM-FKEFHEQNSFNKSLNHTFLVL 253

Query: 32  TPEVDGVENI 3
            P+  GVE++
Sbjct: 254 LPKKGGVEDL 263


>emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]
          Length = 1936

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 25/70 (35%), Positives = 49/70 (70%)
 Frame = -1

Query: 212  VWAAICSIGCDRSPGPDGFLVEFYRKCWEIIRVDFMNMVVVDFNRSGFLAHTLNNSFVTL 33
            ++AA+  +  D++PGPDGF V F++ CWEI++ D ++M    ++++ F+  +LN++F+ L
Sbjct: 1151 IYAALMGMNGDKAPGPDGFTVAFWQNCWEIVKEDVLDMFKEFYDQNSFI-KSLNHTFLVL 1209

Query: 32   TPEVDGVENI 3
             P+  G E++
Sbjct: 1210 IPKKGGAEDL 1219


>gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
          Length = 2749

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/70 (38%), Positives = 41/70 (58%)
 Frame = -1

Query: 212  VWAAICSIGCDRSPGPDGFLVEFYRKCWEIIRVDFMNMVVVDFNRSGFLAHTLNNSFVTL 33
            VW  I  +  D++PGPDGF  +FYR CWEII+ D M +     +R       LN +++TL
Sbjct: 2001 VWDTILHLPSDKAPGPDGFTGKFYRVCWEIIKADVMAVFSAVGSRRFANFQILNTAYITL 2060

Query: 32   TPEVDGVENI 3
             P+ +G + +
Sbjct: 2061 IPKFEGADQV 2070


>emb|CAN77578.1| hypothetical protein VITISV_015344 [Vitis vinifera]
          Length = 1102

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/70 (38%), Positives = 45/70 (64%)
 Frame = -1

Query: 212 VWAAICSIGCDRSPGPDGFLVEFYRKCWEIIRVDFMNMVVVDFNRSGFLAHTLNNSFVTL 33
           + AA+  +  D++PGPDGF + F++ CWE I+ + + M    +  S FL  +LNN+F+ L
Sbjct: 703 IHAALMEMNEDKAPGPDGFTLPFWQSCWEFIKEEILEMFKEFYEHSSFL-KSLNNTFLVL 761

Query: 32  TPEVDGVENI 3
            P+  GVE++
Sbjct: 762 IPKKSGVEDL 771


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/70 (34%), Positives = 44/70 (62%)
 Frame = -1

Query: 212  VWAAICSIGCDRSPGPDGFLVEFYRKCWEIIRVDFMNMVVVDFNRSGFLAHTLNNSFVTL 33
            ++ AIC IG D++PGPDG    FY+ CWEI+  D +  V + F R+ ++  ++N++ + +
Sbjct: 815  IYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKI-FFRTSYMKQSINHTNICM 873

Query: 32   TPEVDGVENI 3
             P++   E +
Sbjct: 874  IPKITNPETL 883