BLASTX nr result

ID: Coptis23_contig00036577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036577
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        109   3e-22
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   107   1e-21
emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]   107   1e-21
ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2...   106   2e-21
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]   105   4e-21

>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/97 (56%), Positives = 69/97 (71%)
 Frame = +1

Query: 1   YFEFSMTDNLSVLDQVHELQILVTKLRELKIVLPESFQVGAIIAKLPRGWNDVRNRLLHK 180
           Y +F M D+ S+L+QVHELQ+LV KL  L I LPE FQVG IIAKLP GW D   R++HK
Sbjct: 121 YLDFQMVDDKSILEQVHELQVLVNKLTALSIPLPEIFQVGVIIAKLPPGWKDFSKRMMHK 180

Query: 181 AEDFSWEEIQKYLRIEEETRLHDNKFLPNDSSKVNNV 291
           +ED+S +E+ K+LRIEEETR  D +      S VN+V
Sbjct: 181 SEDYSLDELLKHLRIEEETRNRDKR--GKVGSSVNHV 215


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/83 (60%), Positives = 63/83 (75%)
 Frame = +1

Query: 1   YFEFSMTDNLSVLDQVHELQILVTKLRELKIVLPESFQVGAIIAKLPRGWNDVRNRLLHK 180
           Y +F   D   +L Q+HELQ++V KL+ LKI LPE+FQVGAI+AKLP  W   R R+LHK
Sbjct: 124 YIDFKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHK 183

Query: 181 AEDFSWEEIQKYLRIEEETRLHD 249
           +ED+S EEIQK+LRIEEE+R  D
Sbjct: 184 SEDYSLEEIQKHLRIEEESRSRD 206


>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
          Length = 1234

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/83 (60%), Positives = 63/83 (75%)
 Frame = +1

Query: 1   YFEFSMTDNLSVLDQVHELQILVTKLRELKIVLPESFQVGAIIAKLPRGWNDVRNRLLHK 180
           Y +F   D   +L Q+HELQ++V KL+ LKI LPE+FQVGAI+AKLP  W   R R+LHK
Sbjct: 124 YIDFKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHK 183

Query: 181 AEDFSWEEIQKYLRIEEETRLHD 249
           +ED+S EEIQK+LRIEEE+R  D
Sbjct: 184 SEDYSLEEIQKHLRIEEESRSRD 206


>ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2-like [Vitis vinifera]
          Length = 1182

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/83 (60%), Positives = 62/83 (74%)
 Frame = +1

Query: 1   YFEFSMTDNLSVLDQVHELQILVTKLRELKIVLPESFQVGAIIAKLPRGWNDVRNRLLHK 180
           Y +F   D   +L Q+HELQ++V KL+ LKI LPE+FQVGAI+AKLP  W   R R+LHK
Sbjct: 116 YIDFKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHK 175

Query: 181 AEDFSWEEIQKYLRIEEETRLHD 249
           +ED+S EEIQK+LRIEEE R  D
Sbjct: 176 SEDYSLEEIQKHLRIEEELRSRD 198


>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
          Length = 804

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = +1

Query: 1   YFEFSMTDNLSVLDQVHELQILVTKLRELKIVLPESFQVGAIIAKLPRGWNDVRNRLLHK 180
           Y +F   D   +L Q+HELQ++V KL+ LKI LPE+FQVGAI+AKLP  W   R R+LHK
Sbjct: 124 YIDFKFFDEKPLLPQIHELQVIVNKLKVLKIELPEAFQVGAIVAKLPSSWKGYRKRILHK 183

Query: 181 AEDFSWEEIQKYLRIEEETRLHD 249
           +ED+S EEIQK+LRI+EE+R  D
Sbjct: 184 SEDYSLEEIQKHLRIKEESRSRD 206


Top