BLASTX nr result

ID: Coptis23_contig00036569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036569
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509706.1| multidrug resistance pump, putative [Ricinus...    67   1e-09
emb|CBI31838.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002274808.1| PREDICTED: multidrug and toxin extrusion pro...    66   3e-09
ref|XP_002510841.1| multidrug resistance pump, putative [Ricinus...    65   6e-09
ref|XP_003555370.1| PREDICTED: multidrug and toxin extrusion pro...    62   6e-08

>ref|XP_002509706.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223549605|gb|EEF51093.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 539

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
 Frame = +2

Query: 5   GMLAAQGSCVVLMLLVLSRTDWVLEAQRAKELTGTVL-----VEDSEEDEETLKDEIKDL 169
           G+LAAQGSCVV ML VL+RTDW L+A+RA++LTG V        D EE++E LK E + L
Sbjct: 469 GLLAAQGSCVVTMLFVLTRTDWELQARRARQLTGNVENVGSDDHDIEEEDEILKLETERL 528

Query: 170 KSALVDSKL 196
            ++L D+ L
Sbjct: 529 SNSLRDNNL 537


>emb|CBI31838.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = +2

Query: 5   GMLAAQGSCVVLMLLVLSRTDWVLEAQRAKELTGTVLVEDSEEDEETLKDEIK 163
           G+LAAQ SCVV ML+VL+RTDW +EAQRAK+LT   LV D EED+  +K EIK
Sbjct: 430 GLLAAQASCVVTMLVVLNRTDWEVEAQRAKQLTSGPLVPD-EEDDLLIKPEIK 481


>ref|XP_002274808.1| PREDICTED: multidrug and toxin extrusion protein 2-like [Vitis
           vinifera]
          Length = 534

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = +2

Query: 5   GMLAAQGSCVVLMLLVLSRTDWVLEAQRAKELTGTVLVEDSEEDEETLKDEIK 163
           G+LAAQ SCVV ML+VL+RTDW +EAQRAK+LT   LV D EED+  +K EIK
Sbjct: 466 GLLAAQASCVVTMLVVLNRTDWEVEAQRAKQLTSGPLVPD-EEDDLLIKPEIK 517


>ref|XP_002510841.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223549956|gb|EEF51443.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 553

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/55 (58%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = +2

Query: 5   GMLAAQGSCVVLMLLVLSRTDWVLEAQRAKELTGTV-LVEDSEEDEETLKDEIKD 166
           G++AAQGSCVV ML+VL  TDW  +AQRAKELTG+V +++D + + +  KDEIK+
Sbjct: 481 GLVAAQGSCVVTMLVVLGCTDWDFQAQRAKELTGSVGIIDDVDGENKPPKDEIKE 535


>ref|XP_003555370.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 550

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
 Frame = +2

Query: 5   GMLAAQGSCVVLMLLVLSRTDWVLEAQRAKELTGTVLVEDSEE--DEETLKDEIK-DLKS 175
           G+LAAQGSC V ML+VLSRTDW  EA RAK+LT +V+V+DS+E   E+  K EIK D   
Sbjct: 475 GLLAAQGSCAVTMLVVLSRTDWDAEALRAKKLT-SVVVDDSKEVGAEKPPKAEIKEDSLL 533

Query: 176 ALVDSKLD 199
           +L DS  D
Sbjct: 534 SLADSDED 541


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