BLASTX nr result

ID: Coptis23_contig00036544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036544
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21786.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-bindin...   174   7e-42
gb|AFK37697.1| unknown [Lotus japonicus]                              172   3e-41
ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-bindin...   171   7e-41
ref|XP_002891872.1| hypothetical protein ARALYDRAFT_474672 [Arab...   171   7e-41

>emb|CBI21786.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  174 bits (441), Expect = 7e-42
 Identities = 87/98 (88%), Positives = 92/98 (93%)
 Frame = +1

Query: 1   ERIEFLNSLGVTESGLGNLIRATYSLLGLHTYFTAGEKETKAWTILSGMTAPQAAGVIHS 180
           ER EFL SLGV+ESGLGNLIRATYSLLGL TYFT+GEKETKAWTIL+GMTAPQAAGVIHS
Sbjct: 258 ERTEFLKSLGVSESGLGNLIRATYSLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHS 317

Query: 181 DFEKGFIRAETVAYNDFVSCGSFADAREKGLLRSEGKD 294
           DFEKGFIRAETVAY+DFV+ GS A AREKGLLRSEGKD
Sbjct: 318 DFEKGFIRAETVAYDDFVAAGSLAAAREKGLLRSEGKD 355


>ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like
           [Vitis vinifera]
          Length = 422

 Score =  174 bits (441), Expect = 7e-42
 Identities = 87/98 (88%), Positives = 92/98 (93%)
 Frame = +1

Query: 1   ERIEFLNSLGVTESGLGNLIRATYSLLGLHTYFTAGEKETKAWTILSGMTAPQAAGVIHS 180
           ER EFL SLGV+ESGLGNLIRATYSLLGL TYFT+GEKETKAWTIL+GMTAPQAAGVIHS
Sbjct: 310 ERTEFLKSLGVSESGLGNLIRATYSLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHS 369

Query: 181 DFEKGFIRAETVAYNDFVSCGSFADAREKGLLRSEGKD 294
           DFEKGFIRAETVAY+DFV+ GS A AREKGLLRSEGKD
Sbjct: 370 DFEKGFIRAETVAYDDFVAAGSLAAAREKGLLRSEGKD 407


>gb|AFK37697.1| unknown [Lotus japonicus]
          Length = 424

 Score =  172 bits (436), Expect = 3e-41
 Identities = 85/98 (86%), Positives = 93/98 (94%)
 Frame = +1

Query: 1   ERIEFLNSLGVTESGLGNLIRATYSLLGLHTYFTAGEKETKAWTILSGMTAPQAAGVIHS 180
           ER E+LNSLGV+ESGLGNLIRATYSLLGL TYFT+GEKETKAWTIL+GMTAPQAAGVIHS
Sbjct: 312 ERKEYLNSLGVSESGLGNLIRATYSLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHS 371

Query: 181 DFEKGFIRAETVAYNDFVSCGSFADAREKGLLRSEGKD 294
           DFEKGFIRAETV+Y+DFV+ GS A AREKG+LRSEGKD
Sbjct: 372 DFEKGFIRAETVSYDDFVAAGSLAAAREKGVLRSEGKD 409


>ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-binding protein EngD-like
           [Cucumis sativus] gi|449523505|ref|XP_004168764.1|
           PREDICTED: GTP-dependent nucleic acid-binding protein
           EngD-like [Cucumis sativus]
          Length = 421

 Score =  171 bits (432), Expect = 7e-41
 Identities = 83/98 (84%), Positives = 93/98 (94%)
 Frame = +1

Query: 1   ERIEFLNSLGVTESGLGNLIRATYSLLGLHTYFTAGEKETKAWTILSGMTAPQAAGVIHS 180
           ER E+L SLGV+ESGLGNLIRATY+LLGL TYFT+GEKETKAWTIL+GMTAPQAAGVIHS
Sbjct: 309 ERFEYLKSLGVSESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHS 368

Query: 181 DFEKGFIRAETVAYNDFVSCGSFADAREKGLLRSEGKD 294
           DFE+GFIRAETVAY+DFV+ GSFA AREKGLLR+EGK+
Sbjct: 369 DFERGFIRAETVAYDDFVAAGSFAAAREKGLLRAEGKE 406


>ref|XP_002891872.1| hypothetical protein ARALYDRAFT_474672 [Arabidopsis lyrata subsp.
           lyrata] gi|297337714|gb|EFH68131.1| hypothetical protein
           ARALYDRAFT_474672 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score =  171 bits (432), Expect = 7e-41
 Identities = 85/98 (86%), Positives = 91/98 (92%)
 Frame = +1

Query: 1   ERIEFLNSLGVTESGLGNLIRATYSLLGLHTYFTAGEKETKAWTILSGMTAPQAAGVIHS 180
           ER E+LNSLGV+ESGLGNLIRATYSLLGL TYFT+GEKET+AWTI +GMTAPQAAGVIHS
Sbjct: 309 ERTEYLNSLGVSESGLGNLIRATYSLLGLQTYFTSGEKETRAWTIHAGMTAPQAAGVIHS 368

Query: 181 DFEKGFIRAETVAYNDFVSCGSFADAREKGLLRSEGKD 294
           DFEKGFIRAETVAY DFVS GS A AREKGLLRSEGK+
Sbjct: 369 DFEKGFIRAETVAYEDFVSAGSLAAAREKGLLRSEGKE 406


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