BLASTX nr result

ID: Coptis23_contig00036524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036524
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239830.1| phytosulfokine receptor 2-like precursor [Gl...    84   2e-18
ref|XP_002282588.1| PREDICTED: phytosulfokine receptor 2-like [V...    85   5e-17
emb|CAN68931.1| hypothetical protein VITISV_006966 [Vitis vinifera]    85   5e-17
ref|XP_003540472.1| PREDICTED: phytosulfokine receptor 2-like [G...    83   6e-17
ref|XP_003541841.1| PREDICTED: phytosulfokine receptor 2-like [G...    81   2e-16

>ref|NP_001239830.1| phytosulfokine receptor 2-like precursor [Glycine max]
           gi|223452341|gb|ACM89498.1| leucine-rich repeat
           transmembrane protein kinase [Glycine max]
          Length = 1043

 Score = 83.6 bits (205), Expect(2) = 2e-18
 Identities = 38/70 (54%), Positives = 55/70 (78%)
 Frame = -2

Query: 269 LNISDNCFNGRIDTKICNASNALQILDLSMNHFSGGLMAEGLTNCSTTLRQLHVDSNLLS 90
           LNIS+N F G+ +++IC+ S  + ILD+S NHF+GGL  E L NCST+L++LH+DSNL S
Sbjct: 174 LNISNNSFTGQFNSQICSTSKGIHILDISKNHFAGGL--EWLGNCSTSLQELHLDSNLFS 231

Query: 89  GHLPDTIFDV 60
           G LPD+++ +
Sbjct: 232 GPLPDSLYSM 241



 Score = 33.5 bits (75), Expect(2) = 2e-18
 Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
 Frame = -3

Query: 76  TLYLMSSLE-LSISFNNFSGQLSKRL 2
           +LY MS+LE LS+S NN SGQLSK L
Sbjct: 237 SLYSMSALEQLSVSVNNLSGQLSKEL 262


>ref|XP_002282588.1| PREDICTED: phytosulfokine receptor 2-like [Vitis vinifera]
          Length = 1053

 Score = 85.1 bits (209), Expect(2) = 5e-17
 Identities = 42/70 (60%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = -2

Query: 266 NISDNCFNGRIDTKICNASNALQILDLSMNHFSGGLMAEGLTNCS-TTLRQLHVDSNLLS 90
           NIS+N FNG I ++ C++SNA+Q++DLSMNHF+GGL  EGL NCS T+L+ LHVD N LS
Sbjct: 185 NISNNFFNGSISSQFCSSSNAIQMIDLSMNHFTGGL--EGLGNCSFTSLQNLHVDYNSLS 242

Query: 89  GHLPDTIFDV 60
           G LP+ +F +
Sbjct: 243 GQLPEFLFSL 252



 Score = 27.3 bits (59), Expect(2) = 5e-17
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -3

Query: 73  LYLMSSLE-LSISFNNFSGQLSKRL 2
           L+ + SLE LSI  NNFSG LS++L
Sbjct: 249 LFSLPSLEQLSIPGNNFSGHLSRKL 273


>emb|CAN68931.1| hypothetical protein VITISV_006966 [Vitis vinifera]
          Length = 1021

 Score = 85.1 bits (209), Expect(2) = 5e-17
 Identities = 42/70 (60%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = -2

Query: 266 NISDNCFNGRIDTKICNASNALQILDLSMNHFSGGLMAEGLTNCS-TTLRQLHVDSNLLS 90
           NIS+N FNG I ++ C++SNA+Q++DLSMNHF+GGL  EGL NCS T+L+ LHVD N LS
Sbjct: 177 NISNNFFNGSISSQFCSSSNAIQMIDLSMNHFTGGL--EGLGNCSFTSLQNLHVDYNSLS 234

Query: 89  GHLPDTIFDV 60
           G LP+ +F +
Sbjct: 235 GQLPEFLFSL 244



 Score = 27.3 bits (59), Expect(2) = 5e-17
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -3

Query: 73  LYLMSSLE-LSISFNNFSGQLSKRL 2
           L+ + SLE LSI  NNFSG LS++L
Sbjct: 241 LFSLPSLEQLSIPGNNFSGHLSRKL 265


>ref|XP_003540472.1| PREDICTED: phytosulfokine receptor 2-like [Glycine max]
          Length = 1058

 Score = 83.2 bits (204), Expect(2) = 6e-17
 Identities = 38/72 (52%), Positives = 53/72 (73%)
 Frame = -2

Query: 275 LPLNISDNCFNGRIDTKICNASNALQILDLSMNHFSGGLMAEGLTNCSTTLRQLHVDSNL 96
           L LN+S+N F GR  ++IC A   L  LDLS+NHF GGL  EGL NC+T+L++LH+DSN 
Sbjct: 186 LALNVSNNSFTGRFSSQICRAPKDLHTLDLSVNHFDGGL--EGLDNCATSLQRLHLDSNA 243

Query: 95  LSGHLPDTIFDV 60
            +G LPD+++ +
Sbjct: 244 FAGSLPDSLYSM 255



 Score = 28.9 bits (63), Expect(2) = 6e-17
 Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = -3

Query: 76  TLYLMSSLE-LSISFNNFSGQLSKRL 2
           +LY MS+LE L++  NN SGQL+K L
Sbjct: 251 SLYSMSALEELTVCANNLSGQLTKHL 276


>ref|XP_003541841.1| PREDICTED: phytosulfokine receptor 2-like [Glycine max]
          Length = 1133

 Score = 81.3 bits (199), Expect(2) = 2e-16
 Identities = 39/72 (54%), Positives = 54/72 (75%)
 Frame = -2

Query: 275 LPLNISDNCFNGRIDTKICNASNALQILDLSMNHFSGGLMAEGLTNCSTTLRQLHVDSNL 96
           L LN+S+N F G   ++IC+AS  L  LDLS+NHF GGL  EGL NC T+L++LH+DSN 
Sbjct: 262 LALNVSNNSFTGGFSSQICSASKDLHTLDLSVNHFDGGL--EGLDNC-TSLQRLHLDSNA 318

Query: 95  LSGHLPDTIFDV 60
            +GHLPD+++ +
Sbjct: 319 FTGHLPDSLYSM 330



 Score = 28.9 bits (63), Expect(2) = 2e-16
 Identities = 15/26 (57%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
 Frame = -3

Query: 76  TLYLMSSLE-LSISFNNFSGQLSKRL 2
           +LY MS+LE L++  NN SGQLS++L
Sbjct: 326 SLYSMSALEELTVCANNLSGQLSEQL 351


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