BLASTX nr result

ID: Coptis23_contig00036523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036523
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   128   8e-28
ref|XP_003537071.1| PREDICTED: ABC transporter B family member 2...   127   1e-27
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   125   7e-27
gb|EEE60966.1| hypothetical protein OsJ_14736 [Oryza sativa Japo...   125   7e-27
gb|EAY93344.1| hypothetical protein OsI_15142 [Oryza sativa Indi...   125   7e-27

>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  128 bits (321), Expect = 8e-28
 Identities = 68/97 (70%), Positives = 84/97 (86%)
 Frame = -2

Query: 594 QKQRLAIARAIYQNSSVLIMDEATSALDSKSEKLVRQAVERLMENHTVLVIAHRLETILM 415
           QKQR+AIARA+YQN S+LI+DEATSALDS+SE LVRQAVERLMEN TVLVIAHRLET+LM
Sbjct: 536 QKQRIAIARALYQNCSILILDEATSALDSRSELLVRQAVERLMENRTVLVIAHRLETVLM 595

Query: 414 ADRIFLLENGNLEEITQTSLLTKSGQYKSQISSELVI 304
           A R+FLL++G LEE+ +++LL   G+  S +S+ LVI
Sbjct: 596 AKRVFLLDDGKLEELNRSALL--GGKSDSLLSTGLVI 630


>ref|XP_003537071.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Glycine max]
          Length = 605

 Score =  127 bits (319), Expect = 1e-27
 Identities = 69/98 (70%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
 Frame = -2

Query: 594 QKQRLAIARAIYQNSSVLIMDEATSALDSKSEKLVRQAVERLMENHTVLVIAHRLETILM 415
           Q+QRLAIARA YQNSS+LI+DEATS+LDSKSE LVRQAVERLM+N TVLVI+HRLET++M
Sbjct: 510 QRQRLAIARAFYQNSSILILDEATSSLDSKSELLVRQAVERLMQNRTVLVISHRLETVMM 569

Query: 414 ADRIFLLENGNLEEITQTSLLTKSGQYK-SQISSELVI 304
           A R+FLL+NG L+E+ Q++LL   G +K S +SS LVI
Sbjct: 570 AKRVFLLDNGKLKELPQSTLL--DGHHKDSLLSSGLVI 605


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  125 bits (313), Expect = 7e-27
 Identities = 67/97 (69%), Positives = 81/97 (83%)
 Frame = -2

Query: 594 QKQRLAIARAIYQNSSVLIMDEATSALDSKSEKLVRQAVERLMENHTVLVIAHRLETILM 415
           QKQRLAIARA+YQ+SS+LI+DEATSALDS+SE LVRQAVERLMENHTVLVIAHRLET+LM
Sbjct: 477 QKQRLAIARALYQDSSILILDEATSALDSRSELLVRQAVERLMENHTVLVIAHRLETVLM 536

Query: 414 ADRIFLLENGNLEEITQTSLLTKSGQYKSQISSELVI 304
           A R+ LL++G L+E+T + L      + SQ  + LVI
Sbjct: 537 AKRVLLLDDGKLQELTPSLL---GSHHSSQTFTGLVI 570


>gb|EEE60966.1| hypothetical protein OsJ_14736 [Oryza sativa Japonica Group]
          Length = 565

 Score =  125 bits (313), Expect = 7e-27
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = -2

Query: 594 QKQRLAIARAIYQNSSVLIMDEATSALDSKSEKLVRQAVERLMENHTVLVIAHRLETILM 415
           QKQRL+IARAIYQNSSVLI+DEATSALDS+SE LV++A+  LM NHTVLVIAHRLE ILM
Sbjct: 466 QKQRLSIARAIYQNSSVLILDEATSALDSRSEILVKEALTNLMANHTVLVIAHRLEMILM 525

Query: 414 ADRIFLLENGNLEEITQTSLLTKSGQYKS 328
           ADRI LLE G L EIT++S L++  Q+ S
Sbjct: 526 ADRIVLLEGGKLREITKSSFLSRDSQFSS 554


>gb|EAY93344.1| hypothetical protein OsI_15142 [Oryza sativa Indica Group]
          Length = 161

 Score =  125 bits (313), Expect = 7e-27
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = -2

Query: 594 QKQRLAIARAIYQNSSVLIMDEATSALDSKSEKLVRQAVERLMENHTVLVIAHRLETILM 415
           QKQRL+IARAIYQNSSVLI+DEATSALDS+SE LV++A+  LM NHTVLVIAHRLE ILM
Sbjct: 62  QKQRLSIARAIYQNSSVLILDEATSALDSRSEILVKEALTNLMANHTVLVIAHRLEMILM 121

Query: 414 ADRIFLLENGNLEEITQTSLLTKSGQYKS 328
           ADRI LLE G L EIT++S L++  Q+ S
Sbjct: 122 ADRIVLLEGGKLREITKSSFLSRDSQFSS 150


Top