BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035510
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]   144   1e-32
ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containi...   128   6e-28
ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26

>ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 558

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/105 (61%), Positives = 85/105 (80%)
 Frame = +3

Query: 3   GINGWDEKAKVRS*MKERRIEKRPGCSLVEVNSVVHEFVSGDNSHPQYEAVRELLGSILE 182
           G+  W EKA VR+ M+E+RI K+PGCSL+ VN ++HEFV+GDN+HPQ+E++RE L S+++
Sbjct: 401 GVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMID 460

Query: 183 RLRLAGYSPDTSNVLFDIEEEEKEKNLSYHSEKLAVAYFLLVSND 317
            L++ GY+PD SNVLFDIEEEEKE  L YHSEKLAVA+ LL   D
Sbjct: 461 SLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKD 505


>emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
          Length = 558

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/105 (61%), Positives = 85/105 (80%)
 Frame = +3

Query: 3   GINGWDEKAKVRS*MKERRIEKRPGCSLVEVNSVVHEFVSGDNSHPQYEAVRELLGSILE 182
           G+  W EKA VR+ M+E+RI K+PGCSL+ VN ++HEFV+GDN+HPQ+E++RE L S+++
Sbjct: 401 GVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMID 460

Query: 183 RLRLAGYSPDTSNVLFDIEEEEKEKNLSYHSEKLAVAYFLLVSND 317
            L++ GY+PD SNVLFDIEEEEKE  L YHSEKLAVA+ LL   D
Sbjct: 461 SLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKD 505


>ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 568

 Score =  128 bits (321), Expect = 6e-28
 Identities = 59/105 (56%), Positives = 77/105 (73%)
 Frame = +3

Query: 3   GINGWDEKAKVRS*MKERRIEKRPGCSLVEVNSVVHEFVSGDNSHPQYEAVRELLGSILE 182
           G+  W +K  VR+ M+E +I K PG SLV ++ V HEFVSGDNSHPQ+E +   LGS+++
Sbjct: 411 GVGNWVKKEGVRNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVID 470

Query: 183 RLRLAGYSPDTSNVLFDIEEEEKEKNLSYHSEKLAVAYFLLVSND 317
            ++L GY+P T NVL DI+EEEKE +L YHSEKLAVA+ LL   D
Sbjct: 471 TVKLGGYTPSTKNVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRD 515


>ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 558

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/101 (59%), Positives = 73/101 (72%)
 Frame = +3

Query: 15  WDEKAKVRS*MKERRIEKRPGCSLVEVNSVVHEFVSGDNSHPQYEAVRELLGSILERLRL 194
           W EKA +RS M+E+RI K PGCS + V+  +HEFVSGDNSHPQ E + + L SI+  LR 
Sbjct: 405 WVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRN 464

Query: 195 AGYSPDTSNVLFDIEEEEKEKNLSYHSEKLAVAYFLLVSND 317
            GY   T NVL DIEEEE+E +LSYHSEKLAVA+ +L   D
Sbjct: 465 RGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKD 505


>ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 558

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/101 (59%), Positives = 73/101 (72%)
 Frame = +3

Query: 15  WDEKAKVRS*MKERRIEKRPGCSLVEVNSVVHEFVSGDNSHPQYEAVRELLGSILERLRL 194
           W EKA +RS M+E+RI K PGCS + V+  +HEFVSGDNSHPQ E + + L SI+  LR 
Sbjct: 405 WVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRN 464

Query: 195 AGYSPDTSNVLFDIEEEEKEKNLSYHSEKLAVAYFLLVSND 317
            GY   T NVL DIEEEE+E +LSYHSEKLAVA+ +L   D
Sbjct: 465 RGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKD 505