BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035307
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arab...    57   2e-06
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]    57   2e-06

>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1724

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/58 (50%), Positives = 41/58 (70%)
 Frame = -2

Query: 174 MIDMDSEFGYIEPSRFLFDEMPKRSKSLWSTTLSGYVGAEFYLKAVELFHKM*VKGIE 1
           +I+M S+FG IE +R++FDEM  R+++ WST LSGYV    Y +AV LF +M   G+E
Sbjct: 785 LINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVE 842


>ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata] gi|297338751|gb|EFH69168.1| hypothetical protein
           ARALYDRAFT_889039 [Arabidopsis lyrata subsp. lyrata]
          Length = 1038

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/78 (38%), Positives = 47/78 (60%)
 Frame = -2

Query: 234 CILSLRAQLVLTANFIFKKKMIDMDSEFGYIEPSRFLFDEMPKRSKSLWSTTLSGYVGAE 55
           C+  L    VL  N      +I+M ++FG ++P+R+LFD+MP R++  W+T +SG V   
Sbjct: 84  CVKGLVRLSVLHTN-----TLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVG 138

Query: 54  FYLKAVELFHKM*VKGIE 1
            YL+ +E F KM   GI+
Sbjct: 139 LYLEGMEFFQKMCDLGIK 156


>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/58 (50%), Positives = 41/58 (70%)
 Frame = -2

Query: 174 MIDMDSEFGYIEPSRFLFDEMPKRSKSLWSTTLSGYVGAEFYLKAVELFHKM*VKGIE 1
           +I+M S+FG IE +R++FDEM  R+++ WST LSGYV    Y +AV LF +M   G+E
Sbjct: 135 LINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVE 192