BLASTX nr result

ID: Coptis23_contig00034938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034938
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330656.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-15
ref|XP_002327317.1| predicted protein [Populus trichocarpa] gi|2...    64   7e-15
gb|AAR92154.1| putative cysteine protease 1 [Iris x hollandica]        64   9e-15
ref|XP_002334495.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-14
ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera]           64   2e-14

>ref|XP_002330656.1| predicted protein [Populus trichocarpa] gi|222872260|gb|EEF09391.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score = 64.7 bits (156), Expect(2) = 4e-15
 Identities = 29/37 (78%), Positives = 29/37 (78%)
 Frame = +1

Query: 58  KTLGGTGWGEEGYIRMQRDIGAAEGLCGIAMDGSYPT 168
           K   GT WGEEGYIRMQRDI   EGLCGIAMD SYPT
Sbjct: 305 KNSWGTSWGEEGYIRMQRDIDTEEGLCGIAMDSSYPT 341



 Score = 41.2 bits (95), Expect(2) = 4e-15
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +2

Query: 2   VTAVGFGATSDGTKYWLVKKLLG 70
           VTAVG+G TSDGTKYWLVK   G
Sbjct: 287 VTAVGYGETSDGTKYWLVKNSWG 309


>ref|XP_002327317.1| predicted protein [Populus trichocarpa] gi|222835687|gb|EEE74122.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score = 63.9 bits (154), Expect(2) = 7e-15
 Identities = 29/37 (78%), Positives = 29/37 (78%)
 Frame = +1

Query: 58  KTLGGTGWGEEGYIRMQRDIGAAEGLCGIAMDGSYPT 168
           K   GT WGEEGYIRMQRD  A EGLCGIAMD SYPT
Sbjct: 305 KNSWGTSWGEEGYIRMQRDTEAEEGLCGIAMDSSYPT 341



 Score = 41.2 bits (95), Expect(2) = 7e-15
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +2

Query: 2   VTAVGFGATSDGTKYWLVKKLLG 70
           VTAVG+G TSDGTKYWLVK   G
Sbjct: 287 VTAVGYGETSDGTKYWLVKNSWG 309


>gb|AAR92154.1| putative cysteine protease 1 [Iris x hollandica]
          Length = 340

 Score = 63.5 bits (153), Expect(2) = 9e-15
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +1

Query: 58  KTLGGTGWGEEGYIRMQRDIGAAEGLCGIAMDGSYPT 168
           K   GT WGE+GYIRM+RD+ A EGLCGIAMD SYPT
Sbjct: 303 KNSWGTSWGEDGYIRMERDVDAKEGLCGIAMDASYPT 339



 Score = 41.2 bits (95), Expect(2) = 9e-15
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +2

Query: 2   VTAVGFGATSDGTKYWLVKKLLG 70
           VT VG+GATSDGTKYWLVK   G
Sbjct: 285 VTLVGYGATSDGTKYWLVKNSWG 307


>ref|XP_002334495.1| predicted protein [Populus trichocarpa] gi|222872550|gb|EEF09681.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score = 63.5 bits (153), Expect(2) = 2e-14
 Identities = 28/32 (87%), Positives = 28/32 (87%)
 Frame = +1

Query: 73  TGWGEEGYIRMQRDIGAAEGLCGIAMDGSYPT 168
           T WGEEGYIRMQRDI A EGLCGIAMD SYPT
Sbjct: 310 TSWGEEGYIRMQRDIDAEEGLCGIAMDSSYPT 341



 Score = 40.4 bits (93), Expect(2) = 2e-14
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +2

Query: 2   VTAVGFGATSDGTKYWLVK 58
           VTAVG+G TSDGTKYWLVK
Sbjct: 287 VTAVGYGETSDGTKYWLVK 305


>ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera]
          Length = 340

 Score = 63.9 bits (154), Expect(2) = 2e-14
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +1

Query: 58  KTLGGTGWGEEGYIRMQRDIGAAEGLCGIAMDGSYPT 168
           K   GTGWGE+GYI M+RDIGA EGLCGIAM+ SYPT
Sbjct: 303 KNSWGTGWGEDGYIWMERDIGADEGLCGIAMEASYPT 339



 Score = 39.7 bits (91), Expect(2) = 2e-14
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +2

Query: 2   VTAVGFGATSDGTKYWLVKKLLG 70
           VTAVG+G T DGTKYWLVK   G
Sbjct: 285 VTAVGYGKTDDGTKYWLVKNSWG 307


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