BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034457
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
ref|XP_002513427.1| pentatricopeptide repeat-containing protein,...   108   6e-22
gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucu...   107   1e-21

>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
           gi|147852271|emb|CAN82234.1| hypothetical protein
           VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/88 (65%), Positives = 74/88 (84%)
 Frame = -2

Query: 266 MAIALLHTMSPLPNPSSTSTKKSCCFFSQIPNLHTPSLNKGFTKILASTHLSIPTKETVF 87
           MAI L++ MSP+ +PS  + +K C FFSQ+PNLHT SLNKGF+++LAST ++I  K+ VF
Sbjct: 1   MAI-LVNAMSPITSPSPENARKVCGFFSQVPNLHTLSLNKGFSRVLASTQITISPKDNVF 59

Query: 86  TLPNWRNGKNDNKTKDLRLNDAFLYLEY 3
           TLPNWR+GKND +T+DLRLNDAFLYLEY
Sbjct: 60  TLPNWRSGKNDPRTRDLRLNDAFLYLEY 87


>ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/84 (59%), Positives = 68/84 (80%)
 Frame = -2

Query: 254 LLHTMSPLPNPSSTSTKKSCCFFSQIPNLHTPSLNKGFTKILASTHLSIPTKETVFTLPN 75
           LL+T+SP+ NPS  +T++ C FFS IPN+   SLNKGF+K+LAST ++I  K+T+FTLPN
Sbjct: 4   LLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFTLPN 63

Query: 74  WRNGKNDNKTKDLRLNDAFLYLEY 3
           W+ GK D K+K+LRLNDAF +LE+
Sbjct: 64  WKIGKLDQKSKELRLNDAFFHLEF 87


>ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/84 (59%), Positives = 68/84 (80%)
 Frame = -2

Query: 254 LLHTMSPLPNPSSTSTKKSCCFFSQIPNLHTPSLNKGFTKILASTHLSIPTKETVFTLPN 75
           LL+T+SP+ NPS  +T++ C FFS IPN+   SLNKGF+K+LAST ++I  K+T+FTLPN
Sbjct: 4   LLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFTLPN 63

Query: 74  WRNGKNDNKTKDLRLNDAFLYLEY 3
           W+ GK D K+K+LRLNDAF +LE+
Sbjct: 64  WKIGKLDQKSKELRLNDAFFHLEF 87


>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score =  108 bits (269), Expect = 6e-22
 Identities = 46/85 (54%), Positives = 69/85 (81%)
 Frame = -2

Query: 257 ALLHTMSPLPNPSSTSTKKSCCFFSQIPNLHTPSLNKGFTKILASTHLSIPTKETVFTLP 78
           +L+H++SPL NP + + + +C FFS IPNLH+ SLNK FT++LAST ++I  K++V TLP
Sbjct: 3   SLVHSVSPLTNPFTEAARIACGFFSHIPNLHSFSLNKDFTRVLASTQITISPKDSVITLP 62

Query: 77  NWRNGKNDNKTKDLRLNDAFLYLEY 3
           NWR+GKND + +D+R++DAF +LE+
Sbjct: 63  NWRSGKNDQRNRDMRISDAFFHLEH 87


>gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/84 (57%), Positives = 66/84 (78%)
 Frame = -2

Query: 254 LLHTMSPLPNPSSTSTKKSCCFFSQIPNLHTPSLNKGFTKILASTHLSIPTKETVFTLPN 75
           LL+T+SP+ N S  +T++ C FFS IPNL   SLNKGF+K+LAST ++I  K+T+FTLPN
Sbjct: 4   LLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFTLPN 63

Query: 74  WRNGKNDNKTKDLRLNDAFLYLEY 3
           W+ GK + K+K+LRL DAF +LE+
Sbjct: 64  WKTGKVEQKSKELRLTDAFFHLEF 87