BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031993
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28216.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-l...   152   3e-35
ref|XP_003609372.1| WD repeat-containing protein [Medicago trunc...   121   7e-26
ref|NP_189790.2| transducin/WD40 domain-containing protein [Arab...   120   1e-25
ref|NP_001190004.1| transducin/WD40 domain-containing protein [A...   120   1e-25

>emb|CBI28216.3| unnamed protein product [Vitis vinifera]
          Length = 1250

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/132 (56%), Positives = 95/132 (71%)
 Frame = -1

Query: 454 WRRKEGEQVYIMCTMEELMPSIGMPVPSPMILAVVLCQSESTLRSVGNFNSDMSPTSVFS 275
           WRRKEGEQV++MCTMEELMPSIG PVPSP ILAVV+C+S+STL+ VGN  S  S +S F 
Sbjct: 236 WRRKEGEQVHVMCTMEELMPSIGTPVPSPSILAVVICKSDSTLQCVGNLYSSGSCSSSFD 295

Query: 274 KDHDSHTEFPSESHNVSKSYLISLADDGNVWSWLLTAEGARDPQKVFTSVNRDAAVTEAT 95
            D D+  +F  ES  VSK++LIS++DDG +W+WLLT+EG  D  K  T+V + A V E  
Sbjct: 296 MDFDNPFDFCDESFYVSKTHLISISDDGKIWNWLLTSEGTEDTHKEATNVGKGADVGEGP 355

Query: 94  DPDTHTNTTDSS 59
              T+TN  D +
Sbjct: 356 VSGTNTNNIDGT 367


>ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-like [Vitis vinifera]
          Length = 1317

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/132 (56%), Positives = 95/132 (71%)
 Frame = -1

Query: 454 WRRKEGEQVYIMCTMEELMPSIGMPVPSPMILAVVLCQSESTLRSVGNFNSDMSPTSVFS 275
           WRRKEGEQV++MCTMEELMPSIG PVPSP ILAVV+C+S+STL+ VGN  S  S +S F 
Sbjct: 323 WRRKEGEQVHVMCTMEELMPSIGTPVPSPSILAVVICKSDSTLQCVGNLYSSGSCSSSFD 382

Query: 274 KDHDSHTEFPSESHNVSKSYLISLADDGNVWSWLLTAEGARDPQKVFTSVNRDAAVTEAT 95
            D D+  +F  ES  VSK++LIS++DDG +W+WLLT+EG  D  K  T+V + A V E  
Sbjct: 383 MDFDNPFDFCDESFYVSKTHLISISDDGKIWNWLLTSEGTEDTHKEATNVGKGADVGEGP 442

Query: 94  DPDTHTNTTDSS 59
              T+TN  D +
Sbjct: 443 VSGTNTNNIDGT 454


>ref|XP_003609372.1| WD repeat-containing protein [Medicago truncatula]
           gi|355510427|gb|AES91569.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 1581

 Score =  121 bits (303), Expect = 7e-26
 Identities = 70/152 (46%), Positives = 92/152 (60%), Gaps = 3/152 (1%)
 Frame = -1

Query: 454 WRRKEGEQVYIMCTMEELMPSIGMPVPSPMILAVVLCQSESTLRSVGNFNSDMSPTSVFS 275
           W+RK GEQV+ M +MEELMPS+G  VPSP IL+VVLCQS+STL+++G   SD+  +    
Sbjct: 332 WKRKPGEQVHTMYSMEELMPSVGTSVPSPSILSVVLCQSDSTLQNIGKNYSDIPSSPYLH 391

Query: 274 KDHDSHTEFPSESHNVSKSYLISLADDGNVWSWLLTAEGARDPQ---KVFTSVNRDAAVT 104
           +D D+  +F  ES  +SK +LIS++DDG +W WLLTAE   D Q   K    VN D  V 
Sbjct: 392 EDFDNPFDFCDESQIISKIHLISISDDGKIWDWLLTAEANADTQKDDKKLGLVNDDCTV- 450

Query: 103 EATDPDTHTNTTDSSIRGSTSGAVKDSEPMND 8
            A D   ++NT  S   G      +  E  ND
Sbjct: 451 -ALD-GANSNTMVSIAGGRELNVGRPQEHPND 480


>ref|NP_189790.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332644192|gb|AEE77713.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 1345

 Score =  120 bits (300), Expect = 1e-25
 Identities = 66/160 (41%), Positives = 92/160 (57%), Gaps = 12/160 (7%)
 Frame = -1

Query: 454 WRRKEGEQVYIMCTMEELMPSIGMPVPSPMILAVVLCQSESTLRSVGNFNSDMSPTSVFS 275
           WRRKEGEQV++MCTMEE MPSIGM +PSP  LAV+L  S+ST++++    + + P    S
Sbjct: 318 WRRKEGEQVHVMCTMEEFMPSIGMSIPSPSALAVLLSHSDSTMQTI----TKIHPDGTSS 373

Query: 274 KDHDSHTEFPSESHNVSKSYLISLADDGNVWSWLLTAEGARDPQKVFTSVNRDAAVTEAT 95
            D D+  +F  ES  VSK+  ISL+DDG +W W+L+AEG  D  K  + ++     TEA 
Sbjct: 374 IDFDNPFDFYDESLLVSKTTFISLSDDGKIWKWVLSAEGVEDALKNASDLDMGIGATEAA 433

Query: 94  DPDTHTNTTDSSI------------RGSTSGAVKDSEPMN 11
            P        SS+            RG TSG+  +   ++
Sbjct: 434 LPGAIQENDSSSLDDELVVAPTNRSRGHTSGSSMEKSDLS 473


>ref|NP_001190004.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332644194|gb|AEE77715.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 1376

 Score =  120 bits (300), Expect = 1e-25
 Identities = 66/160 (41%), Positives = 92/160 (57%), Gaps = 12/160 (7%)
 Frame = -1

Query: 454 WRRKEGEQVYIMCTMEELMPSIGMPVPSPMILAVVLCQSESTLRSVGNFNSDMSPTSVFS 275
           WRRKEGEQV++MCTMEE MPSIGM +PSP  LAV+L  S+ST++++    + + P    S
Sbjct: 318 WRRKEGEQVHVMCTMEEFMPSIGMSIPSPSALAVLLSHSDSTMQTI----TKIHPDGTSS 373

Query: 274 KDHDSHTEFPSESHNVSKSYLISLADDGNVWSWLLTAEGARDPQKVFTSVNRDAAVTEAT 95
            D D+  +F  ES  VSK+  ISL+DDG +W W+L+AEG  D  K  + ++     TEA 
Sbjct: 374 IDFDNPFDFYDESLLVSKTTFISLSDDGKIWKWVLSAEGVEDALKNASDLDMGIGATEAA 433

Query: 94  DPDTHTNTTDSSI------------RGSTSGAVKDSEPMN 11
            P        SS+            RG TSG+  +   ++
Sbjct: 434 LPGAIQENDSSSLDDELVVAPTNRSRGHTSGSSMEKSDLS 473