BLASTX nr result

ID: Coptis23_contig00031979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031979
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66966.1| hypothetical protein VITISV_043228 [Vitis vinifera]    77   1e-12
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                      75   7e-12
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                       75   7e-12
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                      75   7e-12
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                      75   7e-12

>emb|CAN66966.1| hypothetical protein VITISV_043228 [Vitis vinifera]
          Length = 717

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/82 (46%), Positives = 51/82 (62%)
 Frame = +2

Query: 2   SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181
           SLF    +  T Y+L+YVDD                +LS +F MKDLG LHYFLG+EV+ 
Sbjct: 419 SLFVHHTTAGTVYILLYVDDMVLTGTNPALIKTLITRLSKEFAMKDLGSLHYFLGIEVQH 478

Query: 182 TSQAMFLTQSKYILDLLKKANM 247
             Q +FL+Q+KY LDLL++A+M
Sbjct: 479 NFQGLFLSQTKYALDLLQRADM 500


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/82 (43%), Positives = 49/82 (59%)
 Frame = +2

Query: 2    SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181
            SLFT R  +   YVL+YVDD                 L+ +F +KDLG++ YFLG+E  R
Sbjct: 1119 SLFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATR 1178

Query: 182  TSQAMFLTQSKYILDLLKKANM 247
            TS+ + L Q +Y+LDLL+K NM
Sbjct: 1179 TSKGLHLMQKRYVLDLLEKTNM 1200


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/82 (43%), Positives = 49/82 (59%)
 Frame = +2

Query: 2    SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181
            SLFT R  +   YVL+YVDD                 L+ +F +KDLG++ YFLG+E  R
Sbjct: 1115 SLFTLRHKRTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATR 1174

Query: 182  TSQAMFLTQSKYILDLLKKANM 247
            TS+ + L Q +Y+LDLL+K NM
Sbjct: 1175 TSKGLHLMQKRYVLDLLEKTNM 1196


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/82 (43%), Positives = 49/82 (59%)
 Frame = +2

Query: 2    SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181
            SLFT R  +   YVL+YVDD                 L+ +F +KDLG++ YFLG+E  R
Sbjct: 1119 SLFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATR 1178

Query: 182  TSQAMFLTQSKYILDLLKKANM 247
            TS+ + L Q +Y+LDLL+K NM
Sbjct: 1179 TSKGLHLMQKRYVLDLLEKTNM 1200


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/82 (43%), Positives = 49/82 (59%)
 Frame = +2

Query: 2    SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181
            SLFT R  +   YVL+YVDD                 L+ +F +KDLG++ YFLG+E  R
Sbjct: 1119 SLFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATR 1178

Query: 182  TSQAMFLTQSKYILDLLKKANM 247
            TS+ + L Q +Y+LDLL+K NM
Sbjct: 1179 TSKGLHLMQKRYVLDLLEKTNM 1200


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