BLASTX nr result
ID: Coptis23_contig00031979
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00031979 (247 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN66966.1| hypothetical protein VITISV_043228 [Vitis vinifera] 77 1e-12 gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 75 7e-12 gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 75 7e-12 gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 75 7e-12 gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 75 7e-12 >emb|CAN66966.1| hypothetical protein VITISV_043228 [Vitis vinifera] Length = 717 Score = 77.0 bits (188), Expect = 1e-12 Identities = 38/82 (46%), Positives = 51/82 (62%) Frame = +2 Query: 2 SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181 SLF + T Y+L+YVDD +LS +F MKDLG LHYFLG+EV+ Sbjct: 419 SLFVHHTTAGTVYILLYVDDMVLTGTNPALIKTLITRLSKEFAMKDLGSLHYFLGIEVQH 478 Query: 182 TSQAMFLTQSKYILDLLKKANM 247 Q +FL+Q+KY LDLL++A+M Sbjct: 479 NFQGLFLSQTKYALDLLQRADM 500 >gb|AAC02666.1| polyprotein [Arabidopsis thaliana] Length = 1451 Score = 74.7 bits (182), Expect = 7e-12 Identities = 36/82 (43%), Positives = 49/82 (59%) Frame = +2 Query: 2 SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181 SLFT R + YVL+YVDD L+ +F +KDLG++ YFLG+E R Sbjct: 1119 SLFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATR 1178 Query: 182 TSQAMFLTQSKYILDLLKKANM 247 TS+ + L Q +Y+LDLL+K NM Sbjct: 1179 TSKGLHLMQKRYVLDLLEKTNM 1200 >gb|AAC02672.1| polyprotein [Arabidopsis arenosa] Length = 1390 Score = 74.7 bits (182), Expect = 7e-12 Identities = 36/82 (43%), Positives = 49/82 (59%) Frame = +2 Query: 2 SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181 SLFT R + YVL+YVDD L+ +F +KDLG++ YFLG+E R Sbjct: 1115 SLFTLRHKRTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATR 1174 Query: 182 TSQAMFLTQSKYILDLLKKANM 247 TS+ + L Q +Y+LDLL+K NM Sbjct: 1175 TSKGLHLMQKRYVLDLLEKTNM 1196 >gb|AAC02664.1| polyprotein [Arabidopsis thaliana] Length = 1451 Score = 74.7 bits (182), Expect = 7e-12 Identities = 36/82 (43%), Positives = 49/82 (59%) Frame = +2 Query: 2 SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181 SLFT R + YVL+YVDD L+ +F +KDLG++ YFLG+E R Sbjct: 1119 SLFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATR 1178 Query: 182 TSQAMFLTQSKYILDLLKKANM 247 TS+ + L Q +Y+LDLL+K NM Sbjct: 1179 TSKGLHLMQKRYVLDLLEKTNM 1200 >gb|AAC02669.1| polyprotein [Arabidopsis thaliana] Length = 1451 Score = 74.7 bits (182), Expect = 7e-12 Identities = 36/82 (43%), Positives = 49/82 (59%) Frame = +2 Query: 2 SLFTRRDSKCTTYVLIYVDDXXXXXXXXXXXXXXXQQLSLKFPMKDLGQLHYFLGLEVKR 181 SLFT R + YVL+YVDD L+ +F +KDLG++ YFLG+E R Sbjct: 1119 SLFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATR 1178 Query: 182 TSQAMFLTQSKYILDLLKKANM 247 TS+ + L Q +Y+LDLL+K NM Sbjct: 1179 TSKGLHLMQKRYVLDLLEKTNM 1200