BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031978
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    92   6e-17
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    77   1e-12
emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]    77   1e-12
emb|CAN82037.1| hypothetical protein VITISV_033902 [Vitis vinifera]    75   7e-12
emb|CAN71070.1| hypothetical protein VITISV_000084 [Vitis vinifera]    75   7e-12

>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/76 (52%), Positives = 57/76 (75%)
 Frame = +1

Query: 1   ISIMLNGGPQGHFSTGRGLKQGDPLSPMLFAIAEDCLSRSISRLVRENKMQHMVVNSKYS 180
           +SI +NG  QG+FS  RG++QGDPLSP+LF +AED LSRS+++LV + K++ M       
Sbjct: 301 LSICINGSQQGYFSCSRGVRQGDPLSPLLFCLAEDVLSRSLTKLVEQGKLKQMRGTRNCL 360

Query: 181 SPSHLMFADDIFLFCN 228
            PSH+++ADDI +FCN
Sbjct: 361 VPSHILYADDIMIFCN 376


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 32/88 (36%), Positives = 57/88 (64%)
 Frame = +1

Query: 1   ISIMLNGGPQGHFSTGRGLKQGDPLSPMLFAIAEDCLSRSISRLVRENKMQHMVVNSKYS 180
           +S+++NG   G F+   G++QGDPLSP+LF + E+ LSR++S    + ++  M      S
Sbjct: 627 LSVLVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVLSRALSMAATDGQLIPMSYCRGVS 686

Query: 181 SPSHLMFADDIFLFCNANRRCIKHLVHL 264
            P+H+++ADD+ +FC   +R I+ L+ +
Sbjct: 687 FPTHILYADDVLIFCTGTKRNIRRLIKI 714


>emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
          Length = 1971

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
 Frame = +1

Query: 4    SIMLNGGPQGHFSTGRGLKQGDPLSPMLFAIAEDCLSRSISRLVRENKMQHMVVNSKYSS 183
            S+++NG P+G+F++ RGL+QGDPLSP LF +  + LSR I R V    +    VN +  +
Sbjct: 926  SVLINGTPEGYFNSSRGLRQGDPLSPYLFVLGMEALSRLIHRAVGGGFLSGCRVNGRGGN 985

Query: 184  ---PSHLMFADDIFLFCNANRRCIKHLVHLL 267
                SHL+FADD  +FC A+   + HL  LL
Sbjct: 986  GALVSHLLFADDTLVFCEASEDQMVHLSWLL 1016


>emb|CAN82037.1| hypothetical protein VITISV_033902 [Vitis vinifera]
          Length = 1109

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
 Frame = +1

Query: 4   SIMLNGGPQGHFSTGRGLKQGDPLSPMLFAIAEDCLSRSISRLVRENKMQHMVVNSKYSS 183
           S+++NG P+G F++ RGL+QGDP+SP LF I  + LSR I R V    +    V+ +  +
Sbjct: 516 SVLINGTPEGFFNSSRGLRQGDPISPYLFVIGMEALSRLIHRAVEGGFLSGCRVDGRGGN 575

Query: 184 ---PSHLMFADDIFLFCNANRRCIKHLVHLL 267
               SHL+FADD  +FC A+   + HL  LL
Sbjct: 576 GALVSHLLFADDTLVFCEASEDQMVHLSWLL 606


>emb|CAN71070.1| hypothetical protein VITISV_000084 [Vitis vinifera]
          Length = 237

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
 Frame = +1

Query: 4   SIMLNGGPQGHFSTGRGLKQGDPLSPMLFAIAEDCLSRSISRLVRENKMQHMVVNSKYSS 183
           S+++NG P+G+F++ RGL+QGDPLSP LF I  + L+R I R V    +    VN +   
Sbjct: 66  SVLINGTPEGYFNSSRGLRQGDPLSPYLFVIGMEALTRLIHRAVGGGFLSGCRVNGRGGD 125

Query: 184 ---PSHLMFADDIFLFCNANRRCIKHLVHLL 267
               SHL+F DD  +FC A+   + HL  LL
Sbjct: 126 GALVSHLLFVDDTLVFCEASEDQMVHLSWLL 156