BLASTX nr result

ID: Coptis23_contig00031975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031975
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528488.1| solanesyl diphosphate synthase, putative [Ri...    82   6e-14
ref|XP_002300442.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004156502.1| PREDICTED: solanesyl diphosphate synthase 1-...    70   2e-10
ref|XP_004137246.1| PREDICTED: solanesyl diphosphate synthase 1-...    70   2e-10
ref|XP_002331314.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>ref|XP_002528488.1| solanesyl diphosphate synthase, putative [Ricinus communis]
           gi|223532097|gb|EEF33905.1| solanesyl diphosphate
           synthase, putative [Ricinus communis]
          Length = 420

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 14/116 (12%)
 Frame = -3

Query: 306 MMSLTCRNFDISRTRLDLFACGCTSSSN------KNYA----RKC----GGRKLMCNNPL 169
           MMS+TC++ D  RT LDL ACGC+S+++      +NYA    R C      R+L+C    
Sbjct: 1   MMSMTCQSLDFGRTVLDLAACGCSSNASIDRYSVRNYAKPVFRSCNRDYAARRLLCCR-- 58

Query: 168 SDVGRCRAFSAAKTPEAVLNVVDKDPESVINTITKSTTNPSSITSLLEVVADDLQT 1
            D  RCR  S+ KTPE VLN V K P ++++   K +  P S+ +L EVVADDLQT
Sbjct: 59  RDSARCRV-SSTKTPETVLNGVAKGPATLLD--LKESKGPISVKNLFEVVADDLQT 111


>ref|XP_002300442.1| predicted protein [Populus trichocarpa] gi|222847700|gb|EEE85247.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 14/115 (12%)
 Frame = -3

Query: 303 MSLTCRNFDISRTRLDLFACGCTSSSN------KNYA--------RKCGGRKLMCNNPLS 166
           MS+TC N D  R +LDL ACGC+S+++      +NYA        R  G R+L+C+    
Sbjct: 1   MSMTCHNLDFGRAKLDLVACGCSSNASIDRYSVRNYAKSVSKSCNRDYGSRRLVCSR--R 58

Query: 165 DVGRCRAFSAAKTPEAVLNVVDKDPESVINTITKSTTNPSSITSLLEVVADDLQT 1
           D+ RCR  S  KTPE +   V + P  ++  + K +    SIT+L EVVADDLQT
Sbjct: 59  DIARCRV-SPTKTPETLPAGVAEGPAGLLK-LKKDSRESISITNLFEVVADDLQT 111


>ref|XP_004156502.1| PREDICTED: solanesyl diphosphate synthase 1-like [Cucumis sativus]
          Length = 421

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
 Frame = -3

Query: 303 MSLTCRNFDISRTRLDLFACGCTSS--------------SNKNYARKCGGRKLMCNNPLS 166
           MS+ C++ D  R  LD  ACGC+S+              S K   R+   R L+C+    
Sbjct: 1   MSVICQSLDFGRHVLDYVACGCSSNTPLDPHTVRSHVKLSTKGRKRRHQARTLICSQ--R 58

Query: 165 DVGRCRAFSAAKTPEAVLNVVDKDPESVINTITKSTTNPSSITSLLEVVADDLQ 4
            VG+CR FS  K PE VLN ++  P+  +    + + +P S TS+ EVVADDLQ
Sbjct: 59  KVGQCRVFSTTK-PETVLNDINGGPQPFLELRKEESRSPISSTSMFEVVADDLQ 111


>ref|XP_004137246.1| PREDICTED: solanesyl diphosphate synthase 1-like [Cucumis sativus]
          Length = 421

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 14/114 (12%)
 Frame = -3

Query: 303 MSLTCRNFDISRTRLDLFACGCTSS--------------SNKNYARKCGGRKLMCNNPLS 166
           MS+ C++ D  R  LD  ACGC+S+              S K   R+   R L+C+    
Sbjct: 1   MSVICQSLDFGRHVLDYVACGCSSNTPLDPHTVRSHVKLSTKGRKRRHQARTLICSQ--R 58

Query: 165 DVGRCRAFSAAKTPEAVLNVVDKDPESVINTITKSTTNPSSITSLLEVVADDLQ 4
            VG+CR FS  K PE VLN +   P+  +    + + +P S TS+ EVVADDLQ
Sbjct: 59  KVGQCRVFSTTK-PETVLNDITSGPQPFLELRKEESRSPISSTSMFEVVADDLQ 111


>ref|XP_002331314.1| predicted protein [Populus trichocarpa] gi|222873897|gb|EEF11028.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 14/111 (12%)
 Frame = -3

Query: 297 LTCRNFDISRTRLDLFACGCTSS------SNKNYA--------RKCGGRKLMCNNPLSDV 160
           +TCRN D  R +L L AC  +SS      S +NYA        R  G R+++C     D+
Sbjct: 1   MTCRNLDFGRPKLHLVACSFSSSDSIDRYSVRNYAKSVSKSCNRDYGFRRMVCCR--RDI 58

Query: 159 GRCRAFSAAKTPEAVLNVVDKDPESVINTITKSTTNPSSITSLLEVVADDL 7
            RCR  S+ KTP+A+L  V + P  ++N + K +  P S+T+L EVVADDL
Sbjct: 59  ARCRV-SSTKTPQALLARVAEGPTGLLN-LKKESREPVSLTNLFEVVADDL 107


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