BLASTX nr result

ID: Coptis23_contig00031942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031942
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21781.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002267097.2| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ doma...    84   2e-14
ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]...    80   2e-13
emb|CAN74130.1| hypothetical protein VITISV_015701 [Vitis vinifera]    79   4e-13
ref|XP_003545911.1| PREDICTED: BTB/POZ domain-containing protein...    79   5e-13

>emb|CBI21781.3| unnamed protein product [Vitis vinifera]
          Length = 842

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/107 (46%), Positives = 63/107 (58%)
 Frame = -2

Query: 464 ESPSISNGTICDGSSVGQDTEKPCRNFHREVRLSARVDQKFLMKLLEFVYMGFVQVDDDI 285
           ES SI      DGSSV Q TE   + F +EV LS+R+  + L+KLLEFVY+G++Q  +D+
Sbjct: 536 ESVSIHGVESSDGSSVRQYTES-AKKFKKEVHLSSRLRHQPLVKLLEFVYLGYLQAGEDL 594

Query: 284 VKPLKMLARGCDFNSLSQLLSRNRPKWGTKVSCCDFTPALGPSGLHF 144
           VK LK  A+ C    L Q+L RNRPKWG      D   AL   G  F
Sbjct: 595 VKSLKSFAKHCKLQPLLQMLHRNRPKWGMPFPGLDLALALDFDGHTF 641


>ref|XP_002267097.2| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein
           At1g04390-like [Vitis vinifera]
          Length = 853

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/96 (47%), Positives = 59/96 (61%)
 Frame = -2

Query: 431 DGSSVGQDTEKPCRNFHREVRLSARVDQKFLMKLLEFVYMGFVQVDDDIVKPLKMLARGC 252
           DGSSV Q TE   + F +EV LS+R+  + L+KLLEFVY+G++Q  +D+VK LK  A+ C
Sbjct: 558 DGSSVRQYTES-AKKFKKEVHLSSRLRHQPLVKLLEFVYLGYLQAGEDLVKSLKSFAKHC 616

Query: 251 DFNSLSQLLSRNRPKWGTKVSCCDFTPALGPSGLHF 144
               L Q+L RNRPKWG      D   AL   G  F
Sbjct: 617 KLQPLLQMLHRNRPKWGMPFPGLDLALALDFDGHTF 652


>ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]
           gi|297338056|gb|EFH68473.1| F19P19.16 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 978

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/88 (48%), Positives = 55/88 (62%)
 Frame = -2

Query: 407 TEKPCRNFHREVRLSARVDQKFLMKLLEFVYMGFVQVDDDIVKPLKMLARGCDFNSLSQL 228
           TEK  R   +E+R+SA VD   L+KLLEF Y G+V+V+   +K LK LAR C    L Q+
Sbjct: 702 TEKSQRTV-QEIRMSANVDTLALVKLLEFAYSGYVEVESTTLKKLKTLARHCKAKVLLQM 760

Query: 227 LSRNRPKWGTKVSCCDFTPALGPSGLHF 144
           LSR RPKWG+ +   D   AL P  +HF
Sbjct: 761 LSRRRPKWGSPIPGIDLPLALTPKLIHF 788


>emb|CAN74130.1| hypothetical protein VITISV_015701 [Vitis vinifera]
          Length = 1637

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/96 (45%), Positives = 56/96 (58%)
 Frame = -2

Query: 431  DGSSVGQDTEKPCRNFHREVRLSARVDQKFLMKLLEFVYMGFVQVDDDIVKPLKMLARGC 252
            DGS V Q TE   + F +EV LS+ V    L+KLLEFVY+G++Q  +D++K LK  A+ C
Sbjct: 893  DGSPVRQYTEL-MKKFKKEVHLSSHVHYLPLVKLLEFVYLGYLQAGEDLLKSLKSFAKHC 951

Query: 251  DFNSLSQLLSRNRPKWGTKVSCCDFTPALGPSGLHF 144
                L Q+L RNRPKWG      D   AL   G  F
Sbjct: 952  KLQPLLQMLHRNRPKWGMAFPGLDLALALNSDGHTF 987


>ref|XP_003545911.1| PREDICTED: BTB/POZ domain-containing protein At1g04390-like
           [Glycine max]
          Length = 1002

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/88 (45%), Positives = 56/88 (63%)
 Frame = -2

Query: 407 TEKPCRNFHREVRLSARVDQKFLMKLLEFVYMGFVQVDDDIVKPLKMLARGCDFNSLSQL 228
           T+K  R   REV+LS+ VD + L+ LLE+VY+G +   ++ VK LK+LA+ C    L Q+
Sbjct: 716 TDKFVRETMREVQLSSHVDYEALVLLLEYVYLGCLHAGEETVKKLKILAKRCKLQHLLQM 775

Query: 227 LSRNRPKWGTKVSCCDFTPALGPSGLHF 144
           L R RPKWGT     + TP+LG +G  F
Sbjct: 776 LYRQRPKWGTPFPSFNLTPSLGSAGSCF 803


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