BLASTX nr result

ID: Coptis23_contig00031917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031917
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]   102   8e-20
emb|CBI20875.3| unnamed protein product [Vitis vinifera]              102   1e-19
ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13
ref|XP_004136405.1| PREDICTED: protein EMBRYONIC FLOWER 1-like [...    76   1e-11
emb|CAN71329.1| hypothetical protein VITISV_031550 [Vitis vinifera]    74   4e-11

>emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]
          Length = 1388

 Score =  102 bits (255), Expect = 8e-20
 Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 14/234 (5%)
 Frame = +2

Query: 41  STFMELVSTQP--EVEYCGHYFSIRGYVASMRKKDRNTCWPFSF-------EEQVEVLPP 193
           S  ++L+S     E E C H FSIRGYVA +RK+D+  CWPF+        EEQ  +LPP
Sbjct: 181 SISIDLISADEKNEAEKCQH-FSIRGYVAEVRKRDKKICWPFALDESHNKLEEQTCILPP 239

Query: 194 LRVPEFRYWRCEKCLKSADTDAKENGEISNHDKCVSCSRKN----VSMPSHGGASMSLFG 361
           L VP+FR+W C+ CL+   T A E  EI+    C +   K+    + M S G  ++ L  
Sbjct: 240 LDVPKFRWWHCQNCLQEIGTKASEK-EIATVPSCNNTVYKSNGTCLHMTSRGAETVLLLD 298

Query: 362 PQKSSGEGYFEG-KTDASATLGVNEVENNITLSVDIQEKEAEVMDIVREDVYLSTDLVVA 538
             ++      EG K DAS +  VN+ E++++L  D Q+K+AEV              ++ 
Sbjct: 299 YPRALNVDISEGRKVDASTSGNVNDNEHHVSLCSDKQDKQAEV-----------ACSIII 347

Query: 539 AEKNKGCEDGEAGNANKDTFPSDGQDTGTTNKAKEPCLPGVANEAGDEKSLKIS 700
            ++N+  ED +      +  P         N    PCL  +  +AGD  +L+++
Sbjct: 348 GDENRSEEDAD------ZVIPEPPCGAAKVN----PCLL-MEKQAGDTVALELN 390


>emb|CBI20875.3| unnamed protein product [Vitis vinifera]
          Length = 1554

 Score =  102 bits (254), Expect = 1e-19
 Identities = 64/163 (39%), Positives = 92/163 (56%), Gaps = 14/163 (8%)
 Frame = +2

Query: 41  STFMELVSTQP--EVEYCGHYFSIRGYVASMRKKDRNTCWPFSF-------EEQVEVLPP 193
           S  ++L+S     E E C H FSIRGYVA +RK+D+  CWPF+        EEQ  +LPP
Sbjct: 56  SISIDLISADEKNEAEKCQH-FSIRGYVAEVRKRDKKICWPFALDESHNKLEEQTCILPP 114

Query: 194 LRVPEFRYWRCEKCLKSADTDAKENGEISNHDKCVSCSRKN----VSMPSHGGASMSLFG 361
           L VP+FR+W C+ CL+   T A E  EI+    C +   K+    + M S G  ++ L  
Sbjct: 115 LDVPKFRWWHCQNCLQEIGTKASEK-EIATVPSCNNTVYKSNGTCLHMTSRGAETVLLLD 173

Query: 362 PQKSSGEGYFEG-KTDASATLGVNEVENNITLSVDIQEKEAEV 487
             ++      EG K DAS +  VN+ E++++L  D Q+K+AEV
Sbjct: 174 YPRALNVDISEGRKVDASTSGNVNDNEHHVSLCSDKQDKQAEV 216


>ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|222855527|gb|EEE93074.1|
           predicted protein [Populus trichocarpa]
          Length = 1309

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 26/274 (9%)
 Frame = +2

Query: 50  MELVSTQPEVEYCGHYFSIRGYVASMRKKDRNTCWPF-------SFEEQVEVLPPLRVPE 208
           ++ V  + E E C H FS+RGYV+ +RK+D   CWPF       ++EEQ  +LPPL VP+
Sbjct: 35  LDNVDEKVEAEKCSH-FSMRGYVSEIRKRDWKICWPFVSDGDSNNYEEQACLLPPLHVPK 93

Query: 209 FRYWRCEKCLKSADTDAKENGEISNHDKCVSCSRKNVSMPSH----GGASMSLFGPQKSS 376
           FR+WRC+ C+   D  A   G  S   K  S   K+  + SH    G  +M     Q ++
Sbjct: 94  FRFWRCQNCVWEVDATANCYG--STALKSCSTGFKSTKVCSHAPILGDDAMLPSDVQGAA 151

Query: 377 GEGYFEG-KTDASATLGVNEVENNITLSVDIQEKEAEVMDIVREDVYLSTDLVVAAEKNK 553
            +   EG + DA A+L  N  + + + S+D  E++       +++   +    V +E N 
Sbjct: 152 NQEIPEGTQADAFASL-TNTSKCHHSQSIDKNERK------TKDENVSNIGKSVGSEDNL 204

Query: 554 GCEDGEAGNANKDTFPSDGQDTGTTNKA---KEPCL----PG-------VANEAGDEKSL 691
             E+        +   S  Q T  T+K    K  C+    PG        A  A +   +
Sbjct: 205 KQENHRLACVATEVVSSPIQKTDLTDKIAAFKSKCINLCEPGCGHHEVVAAEFARNLNCM 264

Query: 692 KISPKSMCAHGKRKCINDTPAEFPRKKHLGSCRN 793
             +   +C  GK   I+D   E   +   G   N
Sbjct: 265 VNNATEICEAGKETSIDDQYKEIITRGASGEAGN 298


>ref|XP_004136405.1| PREDICTED: protein EMBRYONIC FLOWER 1-like [Cucumis sativus]
          Length = 1215

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
 Frame = +2

Query: 41  STFMELVST--QPEVEYCGHYFSIRGYVASMRKKDRNTCWPFSFE------EQVEVLPPL 196
           S F++L S   +P+   C H FSIRGY + MR+KD   CWPF F+      E + +LPP 
Sbjct: 26  SLFIDLSSCIDKPDAGNCDH-FSIRGYASQMREKDWKKCWPFDFDGDYESAETISLLPPF 84

Query: 197 RVPEFRYWRCEKCLKSADTDAKENGEISNHD 289
            VP+FR+WRC+ C K      +++  +   D
Sbjct: 85  HVPQFRWWRCQNCRKETPAGVEKSSNLDMPD 115


>emb|CAN71329.1| hypothetical protein VITISV_031550 [Vitis vinifera]
          Length = 888

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
 Frame = +2

Query: 98  FSIRGYVASMRKKDRNTCWPFSF-------EEQVEVLPPLRVPEFRYWRCEKCLKSADTD 256
           ++  GYVA +RK+D   CWPF+        EEQ  +LPPL +P+FR W C+ CL+   T 
Sbjct: 270 YTYSGYVAEVRKRDEKICWPFALDESQNKLEEQTCILPPLDLPKFRRWHCQNCLQEIGTK 329

Query: 257 AKENGEISNHDKCVSCSRKN----VSMPSHGGASMSLFGPQKSSGEGYFEGKTDASATLG 424
             E  EI+    C +   K+    + M SHG  ++ L    +             +  + 
Sbjct: 330 DAEK-EIATVPSCNNTVYKSNGTCLHMTSHGSETVLLLDYPR-------------ALNVD 375

Query: 425 VNEVENNITLSVDIQEKEAEV 487
           ++E  N  +L  D QEK+AEV
Sbjct: 376 ISEGRNRASLCSDKQEKQAEV 396


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