BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031905
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516766.1| PREDICTED: 40S ribosomal protein S20-1-like ...    56   3e-06
ref|XP_002302530.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002302399.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_001416866.1| Ribosomal protein S20, component of cytosoli...    56   3e-06
ref|XP_003078013.1| ribosomal protein S20 (ISS) [Ostreococcus ta...    56   3e-06

>ref|XP_003516766.1| PREDICTED: 40S ribosomal protein S20-1-like [Glycine max]
          Length = 135

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +2

Query: 35  SRKCVLILCLSGAKTRTLKVRGPVRIPTKVLKITARNSPCGEG 163
           SRK +    + GAK + L+V+GPVR+PTKVL IT R SPCGEG
Sbjct: 47  SRKALCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEG 89


>ref|XP_002302530.1| predicted protein [Populus trichocarpa] gi|222844256|gb|EEE81803.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +2

Query: 62  LSGAKTRTLKVRGPVRIPTKVLKITARNSPCGEG 163
           + GAK ++LKV+GPVRIPTKVL+IT R +PCGEG
Sbjct: 43  IRGAKDKSLKVKGPVRIPTKVLRITTRKAPCGEG 76


>ref|XP_002302399.1| predicted protein [Populus trichocarpa] gi|222844125|gb|EEE81672.1|
           predicted protein [Populus trichocarpa]
          Length = 75

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/40 (62%), Positives = 33/40 (82%)
 Frame = +2

Query: 44  CVLILCLSGAKTRTLKVRGPVRIPTKVLKITARNSPCGEG 163
           C  ++C  GAK ++LK++GPVRIPTKVL+IT R +PCGEG
Sbjct: 2   CADLIC--GAKDKSLKMKGPVRIPTKVLQITTRKAPCGEG 39


>ref|XP_001416866.1| Ribosomal protein S20, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
           gi|144577092|gb|ABO95159.1| Ribosomal protein S20,
           component of cytosolic 80S ribosome and 40S small
           subunit [Ostreococcus lucimarinus CCE9901]
          Length = 125

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = +2

Query: 62  LSGAKTRTLKVRGPVRIPTKVLKITARNSPCGEG 163
           + GAK + LKV+GPVR+PTKVLK+T R SPCGEG
Sbjct: 46  IRGAKDKRLKVKGPVRMPTKVLKLTVRKSPCGEG 79


>ref|XP_003078013.1| ribosomal protein S20 (ISS) [Ostreococcus tauri]
           gi|116056464|emb|CAL52753.1| ribosomal protein S20 (ISS)
           [Ostreococcus tauri]
          Length = 380

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = +2

Query: 62  LSGAKTRTLKVRGPVRIPTKVLKITARNSPCGEG 163
           + GAK + LKV+GPVR+PTKVLK+T R SPCGEG
Sbjct: 302 IRGAKDKRLKVKGPVRMPTKVLKLTVRKSPCGEG 335