BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031879
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              233   2e-59
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   233   2e-59
ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi...   211   6e-53
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi...   211   6e-53
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   208   3e-52

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  233 bits (593), Expect = 2e-59
 Identities = 113/170 (66%), Positives = 134/170 (78%)
 Frame = -2

Query: 511 ESLGFTPDEMTFGIFISSSSKEGKLKDAFIYLSDLLSRCLKPDIHCYNALLGGVFVKGMW 332
           E LGF+PDE+TFGI IS   +EGKLK+AFIYLS++LSR LKPDI  YNA++ GVF +G+W
Sbjct: 370 EHLGFSPDEITFGILISWCCREGKLKNAFIYLSEILSRDLKPDICSYNAIISGVFKEGLW 429

Query: 331 KHASEIFHEMLENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPL 152
           KHA +I HEM++ G  PDL TFRVLLAGYCK RRF EAKA V EMVN+G++QL   EDPL
Sbjct: 430 KHAQDILHEMVDMGIKPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPL 489

Query: 151 SKAFGILGFKPSTVKVKRDNDAGLSKAEFFDTLGNGFYLDTDIKEYEKTV 2
           SKAF +L   P  ++VKRDND G SK EFFD LGNG YL+TD+ EYEK V
Sbjct: 490 SKAFMVLELDPLAIRVKRDNDVGFSKTEFFDNLGNGLYLETDVDEYEKKV 539


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Vitis vinifera]
          Length = 1273

 Score =  233 bits (593), Expect = 2e-59
 Identities = 113/170 (66%), Positives = 134/170 (78%)
 Frame = -2

Query: 511 ESLGFTPDEMTFGIFISSSSKEGKLKDAFIYLSDLLSRCLKPDIHCYNALLGGVFVKGMW 332
           E LGF+PDE+TFGI IS   +EGKLK+AFIYLS++LSR LKPDI  YNA++ GVF +G+W
Sbjct: 387 EHLGFSPDEITFGILISWCCREGKLKNAFIYLSEILSRDLKPDICSYNAIISGVFKEGLW 446

Query: 331 KHASEIFHEMLENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPL 152
           KHA +I HEM++ G  PDL TFRVLLAGYCK RRF EAKA V EMVN+G++QL   EDPL
Sbjct: 447 KHAQDILHEMVDMGIKPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPL 506

Query: 151 SKAFGILGFKPSTVKVKRDNDAGLSKAEFFDTLGNGFYLDTDIKEYEKTV 2
           SKAF +L   P  ++VKRDND G SK EFFD LGNG YL+TD+ EYEK V
Sbjct: 507 SKAFMVLELDPLAIRVKRDNDVGFSKTEFFDNLGNGLYLETDVDEYEKKV 556


>ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1225

 Score =  211 bits (536), Expect = 6e-53
 Identities = 102/168 (60%), Positives = 127/168 (75%)
 Frame = -2

Query: 511 ESLGFTPDEMTFGIFISSSSKEGKLKDAFIYLSDLLSRCLKPDIHCYNALLGGVFVKGMW 332
           E  GF PDE+TFGI I  S  EG L+ AFIY+S+LLS  LKPD+H YNAL+ G+F KG+W
Sbjct: 358 EHTGFKPDEITFGILICWSCHEGNLRQAFIYMSELLSSGLKPDLHSYNALISGMFKKGLW 417

Query: 331 KHASEIFHEMLENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPL 152
           ++A  I  EM++ G  P+LSTFR+LLAGYCK R+F EAK IV+EM   G ++LS V+D L
Sbjct: 418 ENAQGILAEMVDQGIEPNLSTFRILLAGYCKARQFEEAKKIVIEMEICGFIKLSSVDDQL 477

Query: 151 SKAFGILGFKPSTVKVKRDNDAGLSKAEFFDTLGNGFYLDTDIKEYEK 8
            K F  LGF  S+V++KRDN+ G+SK EFFDTLGNG YLDTD+ EYEK
Sbjct: 478 CKIFSFLGFSESSVRLKRDNNTGVSKTEFFDTLGNGLYLDTDLDEYEK 525


>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1246

 Score =  211 bits (536), Expect = 6e-53
 Identities = 102/168 (60%), Positives = 127/168 (75%)
 Frame = -2

Query: 511 ESLGFTPDEMTFGIFISSSSKEGKLKDAFIYLSDLLSRCLKPDIHCYNALLGGVFVKGMW 332
           E  GF PDE+TFGI I  S  EG L+ AFIY+S+LLS  LKPD+H YNAL+ G+F KG+W
Sbjct: 358 EHTGFKPDEITFGILICWSCHEGNLRQAFIYMSELLSSGLKPDLHSYNALISGMFKKGLW 417

Query: 331 KHASEIFHEMLENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPL 152
           ++A  I  EM++ G  P+LSTFR+LLAGYCK R+F EAK IV+EM   G ++LS V+D L
Sbjct: 418 ENAQGILAEMVDQGIEPNLSTFRILLAGYCKARQFEEAKKIVIEMEICGFIKLSSVDDQL 477

Query: 151 SKAFGILGFKPSTVKVKRDNDAGLSKAEFFDTLGNGFYLDTDIKEYEK 8
            K F  LGF  S+V++KRDN+ G+SK EFFDTLGNG YLDTD+ EYEK
Sbjct: 478 CKIFSFLGFSESSVRLKRDNNTGVSKTEFFDTLGNGLYLDTDLDEYEK 525


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
           predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  208 bits (530), Expect = 3e-52
 Identities = 100/170 (58%), Positives = 128/170 (75%)
 Frame = -2

Query: 511 ESLGFTPDEMTFGIFISSSSKEGKLKDAFIYLSDLLSRCLKPDIHCYNALLGGVFVKGMW 332
           E LGF PDE+TFGI I    +E KL  AF YLS+LLSR LKP+I CY+AL+  +F +GMW
Sbjct: 272 EHLGFMPDEVTFGILICWCCRERKLSGAFNYLSELLSRGLKPNIWCYHALISALFKEGMW 331

Query: 331 KHASEIFHEMLENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPL 152
           +HA +I  EM++ G AP LSTF++LLAGYC+ RRF+E K ++ EMVN G+++ S +EDPL
Sbjct: 332 EHAQDILDEMVDMGTAPVLSTFKILLAGYCRARRFDEVKVVIHEMVNRGLIESSALEDPL 391

Query: 151 SKAFGILGFKPSTVKVKRDNDAGLSKAEFFDTLGNGFYLDTDIKEYEKTV 2
           SKAF +L  K  +V++KRDND   SK EFFD LGNG YLDTD+ EY+K V
Sbjct: 392 SKAFMVLELKTLSVRLKRDNDVEFSKTEFFDNLGNGLYLDTDLDEYDKRV 441