BLASTX nr result

ID: Coptis23_contig00031873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031873
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635661.1| PREDICTED: endoglucanase 12-like, partial [V...    57   2e-06
ref|XP_002266444.2| PREDICTED: endoglucanase 12-like [Vitis vini...    57   2e-06
emb|CBI18623.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|NP_001147537.1| endo-1,4-beta-glucanase [Zea mays] gi|195612...    56   3e-06
ref|XP_003560035.1| PREDICTED: endoglucanase 10-like [Brachypodi...    55   6e-06

>ref|XP_003635661.1| PREDICTED: endoglucanase 12-like, partial [Vitis vinifera]
          Length = 339

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = +3

Query: 6   WDEIL*AFSRLFFATGRPKYLTHATNYNAVLRAGLTFLTLGLQSCVPRWDKKFPFVHVLL 185
           +DE +   + LF+ATG   Y++ ATN      +   ++   L   VP WD K P   +LL
Sbjct: 202 FDEYMWGAAWLFYATGNKSYISLATNPGLPKNSKAFYMIPDLS--VPSWDNKLPAAMLLL 259

Query: 186 TRLRFFLSPGHPAE 227
           TRLR FLSPG+P E
Sbjct: 260 TRLRIFLSPGYPYE 273


>ref|XP_002266444.2| PREDICTED: endoglucanase 12-like [Vitis vinifera]
          Length = 536

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = +3

Query: 6   WDEIL*AFSRLFFATGRPKYLTHATNYNAVLRAGLTFLTLGLQSCVPRWDKKFPFVHVLL 185
           +DE +   + LF+ATG   Y++ ATN      +   ++   L   VP WD K P   +LL
Sbjct: 246 FDEYMWGAAWLFYATGNKSYISLATNPGLPKNSKAFYMIPDLS--VPSWDNKLPAAMLLL 303

Query: 186 TRLRFFLSPGHPAE 227
           TRLR FLSPG+P E
Sbjct: 304 TRLRIFLSPGYPYE 317


>emb|CBI18623.3| unnamed protein product [Vitis vinifera]
          Length = 438

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = +3

Query: 6   WDEIL*AFSRLFFATGRPKYLTHATNYNAVLRAGLTFLTLGLQSCVPRWDKKFPFVHVLL 185
           +DE +   + LF+ATG   Y++ ATN      +   ++   L   VP WD K P   +LL
Sbjct: 148 FDEYMWGAAWLFYATGNKSYISLATNPGLPKNSKAFYMIPDLS--VPSWDNKLPAAMLLL 205

Query: 186 TRLRFFLSPGHPAE 227
           TRLR FLSPG+P E
Sbjct: 206 TRLRIFLSPGYPYE 219


>ref|NP_001147537.1| endo-1,4-beta-glucanase [Zea mays] gi|195612054|gb|ACG27857.1|
           endo-1,4-beta-glucanase [Zea mays]
           gi|413955826|gb|AFW88475.1| endo-1,4-beta-glucanase [Zea
           mays]
          Length = 620

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/74 (45%), Positives = 39/74 (52%)
 Frame = +3

Query: 6   WDEIL*AFSRLFFATGRPKYLTHATNYNAVLRAGLTFLTLGLQSCVPRWDKKFPFVHVLL 185
           WDE L   S ++ ATG   YLT ATN      AG  +   G    V  WD K     VLL
Sbjct: 330 WDEFLWGSSWMYLATGNSSYLTLATNPKLAKHAGAFWG--GPDYGVFSWDNKLTGAQVLL 387

Query: 186 TRLRFFLSPGHPAE 227
           +RLR FLSPG+P E
Sbjct: 388 SRLRLFLSPGYPYE 401


>ref|XP_003560035.1| PREDICTED: endoglucanase 10-like [Brachypodium distachyon]
          Length = 621

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/74 (44%), Positives = 40/74 (54%)
 Frame = +3

Query: 6   WDEIL*AFSRLFFATGRPKYLTHATNYNAVLRAGLTFLTLGLQSCVPRWDKKFPFVHVLL 185
           WDE +   + ++FATG   YLT AT       AG  +L       V  WD K P   VLL
Sbjct: 328 WDEFVWGGAWMYFATGNTSYLTIATAPGMAKHAGAFWLGSPNYG-VFTWDDKLPGSQVLL 386

Query: 186 TRLRFFLSPGHPAE 227
           +RLR FLSPG+P E
Sbjct: 387 SRLRLFLSPGYPYE 400


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