BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031849
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subun...   167   6e-40
ref|XP_002517336.1| protein farnesyltransferase beta subunit, pu...   165   3e-39
ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subun...   155   3e-36
gb|ACU15006.1| unknown [Glycine max]                                  154   9e-36
ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subun...   153   2e-35

>ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subunit beta-like isoform 1
           [Vitis vinifera]
          Length = 438

 Score =  167 bits (424), Expect = 6e-40
 Identities = 74/110 (67%), Positives = 94/110 (85%)
 Frame = +2

Query: 2   ESMSNSRVTITQREQWMVESKVSEIYQLFSSFPYHAQTLMLDVQRDEHIEYLNKGLKQLG 181
           +S      T+TQREQWMVES+V ++Y+L SS P +AQ+++L++QRD+HIE+L  GL+QLG
Sbjct: 2   DSSETQSPTVTQREQWMVESQVFQMYELLSSVPRNAQSVLLELQRDKHIEFLTNGLRQLG 61

Query: 182 PSFCVLDANRPWLCYWILHSMALLGESVDCDLENGAVDFLSRCQDSHGGY 331
           PSFCVLDANRPWLCYWILHS+ALLG+SVD +LEN  +DFLSRCQD +GGY
Sbjct: 62  PSFCVLDANRPWLCYWILHSIALLGDSVDDELENNTIDFLSRCQDPNGGY 111


>ref|XP_002517336.1| protein farnesyltransferase beta subunit, putative [Ricinus
           communis] gi|223543347|gb|EEF44878.1| protein
           farnesyltransferase beta subunit, putative [Ricinus
           communis]
          Length = 438

 Score =  165 bits (418), Expect = 3e-39
 Identities = 72/110 (65%), Positives = 93/110 (84%)
 Frame = +2

Query: 2   ESMSNSRVTITQREQWMVESKVSEIYQLFSSFPYHAQTLMLDVQRDEHIEYLNKGLKQLG 181
           ES S  R T +Q EQW+V+ +V +IY +F++ P+ AQTLML++QRD+H+EYL +GLKQL 
Sbjct: 5   ESSSRRRATASQHEQWIVQDQVFQIYDIFANIPHKAQTLMLELQRDKHMEYLTRGLKQLS 64

Query: 182 PSFCVLDANRPWLCYWILHSMALLGESVDCDLENGAVDFLSRCQDSHGGY 331
            SFCVLDANRPWLCYWILHS+ALLGES+D +LEN A+DFL+RCQD +GG+
Sbjct: 65  SSFCVLDANRPWLCYWILHSIALLGESIDYELENNAIDFLNRCQDPNGGF 114


>ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subunit beta [Glycine max]
          Length = 455

 Score =  155 bits (392), Expect = 3e-36
 Identities = 68/102 (66%), Positives = 89/102 (87%)
 Frame = +2

Query: 26  TITQREQWMVESKVSEIYQLFSSFPYHAQTLMLDVQRDEHIEYLNKGLKQLGPSFCVLDA 205
           T++QREQWMVES+V +IYQLF++ P +AQTLML++QRD H++Y++KGL+ L  +F VLDA
Sbjct: 19  TVSQREQWMVESQVFQIYQLFATIPRNAQTLMLELQRDNHMQYVSKGLRHLSSAFSVLDA 78

Query: 206 NRPWLCYWILHSMALLGESVDCDLENGAVDFLSRCQDSHGGY 331
           NRPWLCYWI HS+AL GESVD +LE+ A+DFL+RCQD +GGY
Sbjct: 79  NRPWLCYWIFHSIALSGESVDDELEDNAIDFLNRCQDPNGGY 120


>gb|ACU15006.1| unknown [Glycine max]
          Length = 224

 Score =  154 bits (388), Expect = 9e-36
 Identities = 67/102 (65%), Positives = 88/102 (86%)
 Frame = +2

Query: 26  TITQREQWMVESKVSEIYQLFSSFPYHAQTLMLDVQRDEHIEYLNKGLKQLGPSFCVLDA 205
           T++QREQWMVES+V +IYQLF++ P +AQTLML++QRD H++Y++KGL+ L  +F VLDA
Sbjct: 19  TVSQREQWMVESQVFQIYQLFATIPRNAQTLMLELQRDNHMQYVSKGLRHLSSAFSVLDA 78

Query: 206 NRPWLCYWILHSMALLGESVDCDLENGAVDFLSRCQDSHGGY 331
           NRPWLCYWI HS+AL GESVD +LE+ A+DF +RCQD +GGY
Sbjct: 79  NRPWLCYWIFHSIALSGESVDDELEDNAIDFFNRCQDPNGGY 120


>ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subunit beta-like [Glycine
           max]
          Length = 455

 Score =  153 bits (386), Expect = 2e-35
 Identities = 67/102 (65%), Positives = 87/102 (85%)
 Frame = +2

Query: 26  TITQREQWMVESKVSEIYQLFSSFPYHAQTLMLDVQRDEHIEYLNKGLKQLGPSFCVLDA 205
           T++QR+QWMVES+V +IYQLF++ P  AQ LML++QRD H++YL+KGL+ L  +F VLDA
Sbjct: 19  TVSQRDQWMVESQVFQIYQLFATIPGSAQNLMLELQRDNHMQYLSKGLRHLSSAFSVLDA 78

Query: 206 NRPWLCYWILHSMALLGESVDCDLENGAVDFLSRCQDSHGGY 331
           NRPWLCYWI HS+ALLGESVD +LE+  +DFL+RCQD +GGY
Sbjct: 79  NRPWLCYWIFHSIALLGESVDDELEDNTIDFLNRCQDPNGGY 120