BLASTX nr result

ID: Coptis23_contig00031837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031837
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26223.3| unnamed protein product [Vitis vinifera]              233   2e-59
ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [V...   233   2e-59
ref|XP_002315783.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   224   4e-57
ref|XP_003610694.1| Chloride channel protein CLC-d [Medicago tru...   220   8e-56
ref|XP_003610693.1| Chloride channel protein CLC-d [Medicago tru...   220   8e-56

>emb|CBI26223.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  233 bits (593), Expect = 2e-59
 Identities = 109/139 (78%), Positives = 118/139 (84%)
 Frame = -2

Query: 419 GQEDYSFEELFPMXXXXXXXXXXXXLFNQLTRYITYWRRKYLHKRGNRVKIIEICLISVI 240
           GQEDYSFEEL PM            LFNQLT YITYWRR YLHK+G+RVK+IE+CL+S+I
Sbjct: 309 GQEDYSFEELLPMAIIGVIGGLLGALFNQLTIYITYWRRNYLHKKGSRVKMIEVCLVSLI 368

Query: 239 TSVISFGLPLLRKCSPCPEADVNSDIGCPRPPGMYGNYVNFYCSKEGEYNDLATIFFNTQ 60
           TSVISFGLPLLRKCSPCPE ++NS I CPRPPGMYGNYVNFYC K+ EYNDLATIFFNTQ
Sbjct: 369 TSVISFGLPLLRKCSPCPEVELNSGIECPRPPGMYGNYVNFYCDKDNEYNDLATIFFNTQ 428

Query: 59  DDAIRNLFSAKTFHEYSAQ 3
           DDAIRNLFSAKT HEYSAQ
Sbjct: 429 DDAIRNLFSAKTIHEYSAQ 447


>ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [Vitis vinifera]
           gi|301318138|gb|ADK66984.1| chloride channel ClC6 [Vitis
           vinifera]
          Length = 771

 Score =  233 bits (593), Expect = 2e-59
 Identities = 109/139 (78%), Positives = 118/139 (84%)
 Frame = -2

Query: 419 GQEDYSFEELFPMXXXXXXXXXXXXLFNQLTRYITYWRRKYLHKRGNRVKIIEICLISVI 240
           GQEDYSFEEL PM            LFNQLT YITYWRR YLHK+G+RVK+IE+CL+S+I
Sbjct: 309 GQEDYSFEELLPMAIIGVIGGLLGALFNQLTIYITYWRRNYLHKKGSRVKMIEVCLVSLI 368

Query: 239 TSVISFGLPLLRKCSPCPEADVNSDIGCPRPPGMYGNYVNFYCSKEGEYNDLATIFFNTQ 60
           TSVISFGLPLLRKCSPCPE ++NS I CPRPPGMYGNYVNFYC K+ EYNDLATIFFNTQ
Sbjct: 369 TSVISFGLPLLRKCSPCPEVELNSGIECPRPPGMYGNYVNFYCDKDNEYNDLATIFFNTQ 428

Query: 59  DDAIRNLFSAKTFHEYSAQ 3
           DDAIRNLFSAKT HEYSAQ
Sbjct: 429 DDAIRNLFSAKTIHEYSAQ 447


>ref|XP_002315783.1| Cl-channel clc-7 [Populus trichocarpa] gi|222864823|gb|EEF01954.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 752

 Score =  224 bits (572), Expect = 4e-57
 Identities = 108/139 (77%), Positives = 114/139 (82%)
 Frame = -2

Query: 419 GQEDYSFEELFPMXXXXXXXXXXXXLFNQLTRYITYWRRKYLHKRGNRVKIIEICLISVI 240
           GQEDYSF EL PM            LFNQLT +ITYWRR YLHK GNRVKIIE CLISVI
Sbjct: 309 GQEDYSFGELLPMAVIGVIGGLLGALFNQLTLHITYWRRNYLHKNGNRVKIIEACLISVI 368

Query: 239 TSVISFGLPLLRKCSPCPEADVNSDIGCPRPPGMYGNYVNFYCSKEGEYNDLATIFFNTQ 60
           TS ISFGLPLLRKC+PCPE+D +S I CPRPPGMYGNYVNFYC K+ EYNDLATIFFNTQ
Sbjct: 369 TSAISFGLPLLRKCNPCPESDPDSGIECPRPPGMYGNYVNFYCGKDKEYNDLATIFFNTQ 428

Query: 59  DDAIRNLFSAKTFHEYSAQ 3
           DDAIRNLFSAKT HE+SAQ
Sbjct: 429 DDAIRNLFSAKTIHEFSAQ 447


>ref|XP_003610694.1| Chloride channel protein CLC-d [Medicago truncatula]
           gi|355512029|gb|AES93652.1| Chloride channel protein
           CLC-d [Medicago truncatula]
          Length = 777

 Score =  220 bits (561), Expect = 8e-56
 Identities = 106/139 (76%), Positives = 114/139 (82%)
 Frame = -2

Query: 419 GQEDYSFEELFPMXXXXXXXXXXXXLFNQLTRYITYWRRKYLHKRGNRVKIIEICLISVI 240
           GQEDYSF EL PM            LFNQLT YIT WRR +LHK+GNRVKIIE CL+SV+
Sbjct: 314 GQEDYSFAELLPMAIIGVIGGLLGALFNQLTLYITTWRRNHLHKKGNRVKIIEACLVSVL 373

Query: 239 TSVISFGLPLLRKCSPCPEADVNSDIGCPRPPGMYGNYVNFYCSKEGEYNDLATIFFNTQ 60
           TSVISFGLPLLRKCSPCPE D  S I CPRPPGMYGNYVNF+CSK+ EYNDLATIFFNTQ
Sbjct: 374 TSVISFGLPLLRKCSPCPEPDPASGIECPRPPGMYGNYVNFFCSKDNEYNDLATIFFNTQ 433

Query: 59  DDAIRNLFSAKTFHEYSAQ 3
           DDAIRNLFSAKT +EYS+Q
Sbjct: 434 DDAIRNLFSAKTINEYSSQ 452


>ref|XP_003610693.1| Chloride channel protein CLC-d [Medicago truncatula]
           gi|355512028|gb|AES93651.1| Chloride channel protein
           CLC-d [Medicago truncatula]
          Length = 847

 Score =  220 bits (561), Expect = 8e-56
 Identities = 106/139 (76%), Positives = 114/139 (82%)
 Frame = -2

Query: 419 GQEDYSFEELFPMXXXXXXXXXXXXLFNQLTRYITYWRRKYLHKRGNRVKIIEICLISVI 240
           GQEDYSF EL PM            LFNQLT YIT WRR +LHK+GNRVKIIE CL+SV+
Sbjct: 344 GQEDYSFAELLPMAIIGVIGGLLGALFNQLTLYITTWRRNHLHKKGNRVKIIEACLVSVL 403

Query: 239 TSVISFGLPLLRKCSPCPEADVNSDIGCPRPPGMYGNYVNFYCSKEGEYNDLATIFFNTQ 60
           TSVISFGLPLLRKCSPCPE D  S I CPRPPGMYGNYVNF+CSK+ EYNDLATIFFNTQ
Sbjct: 404 TSVISFGLPLLRKCSPCPEPDPASGIECPRPPGMYGNYVNFFCSKDNEYNDLATIFFNTQ 463

Query: 59  DDAIRNLFSAKTFHEYSAQ 3
           DDAIRNLFSAKT +EYS+Q
Sbjct: 464 DDAIRNLFSAKTINEYSSQ 482


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