BLASTX nr result
ID: Coptis23_contig00031833
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00031833 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_002339503.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 >ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|222836943|gb|EEE75336.1| predicted protein [Populus trichocarpa] Length = 598 Score = 62.0 bits (149), Expect = 5e-08 Identities = 36/113 (31%), Positives = 56/113 (49%) Frame = +1 Query: 16 RTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCPKN 195 R SYARVCVEID S + + + + I EY W P++CS C+VFGHT + CP N Sbjct: 105 RLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSDCNVFGHTTALCPNN 164 Query: 196 TNLARDPRNTVWLKKETKGEVKQGEAGKTSVEVQEVHVIDKEAEWEIPRKKHR 354 N LK +G+ G S + ++ + +W++ K+++ Sbjct: 165 --------NIDNLKVVAEGKSNLGAMNSKSADNKQ-----NQFQWQVVGKRNK 204 >ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|222874876|gb|EEF12007.1| predicted protein [Populus trichocarpa] Length = 603 Score = 60.1 bits (144), Expect = 2e-07 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 13/121 (10%) Frame = +1 Query: 10 KTRTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCP 189 + R SYARVCVEID S + + + + I EY W P++CS+C+VFGHT + C Sbjct: 144 RVRLSYARVCVEIDASKTLVKEYDLCCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 203 Query: 190 KNT--NL---ARDPRNTVWLKKE--------TKGEVKQGEAGKTSVEVQEVHVIDKEAEW 330 N NL A D RN + E + ++KQ + ++ Q++ + + + Sbjct: 204 TNNIDNLKVVAEDVRNAACHEDENPSSPLVLNREDMKQEQGAASTALDQDMDAMGGDTDG 263 Query: 331 E 333 E Sbjct: 264 E 264 >ref|XP_002339503.1| predicted protein [Populus trichocarpa] gi|222875281|gb|EEF12412.1| predicted protein [Populus trichocarpa] Length = 276 Score = 59.3 bits (142), Expect = 3e-07 Identities = 35/115 (30%), Positives = 57/115 (49%) Frame = +1 Query: 10 KTRTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCP 189 + R SYARVCVEID S + + + + I EY W P++CS+C+VFGHT + C Sbjct: 22 RKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 81 Query: 190 KNTNLARDPRNTVWLKKETKGEVKQGEAGKTSVEVQEVHVIDKEAEWEIPRKKHR 354 N N LK +G+ G S + ++ + +W++ K+++ Sbjct: 82 TN--------NIDNLKVVAEGKRNLGAMNSKSADNKQ-----NQFQWQVVGKRNK 123 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 59.3 bits (142), Expect = 3e-07 Identities = 35/115 (30%), Positives = 57/115 (49%) Frame = +1 Query: 10 KTRTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCP 189 + R SYARVCVEID S + + + + I EY W P++CS+C+VFGHT + C Sbjct: 279 RKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 338 Query: 190 KNTNLARDPRNTVWLKKETKGEVKQGEAGKTSVEVQEVHVIDKEAEWEIPRKKHR 354 N N LK +G+ G S + ++ + +W++ K+++ Sbjct: 339 TN--------NIDNLKVVAEGKRNLGAMNSKSADNKQ-----NQFQWQVVGKRNK 380 >ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1| predicted protein [Populus trichocarpa] Length = 809 Score = 59.3 bits (142), Expect = 3e-07 Identities = 35/115 (30%), Positives = 57/115 (49%) Frame = +1 Query: 10 KTRTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCP 189 + R SYARVCVEID S + + + + I EY W P++CS+C+VFGHT + C Sbjct: 279 RKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 338 Query: 190 KNTNLARDPRNTVWLKKETKGEVKQGEAGKTSVEVQEVHVIDKEAEWEIPRKKHR 354 N N LK +G+ G S + ++ + +W++ K+++ Sbjct: 339 TN--------NIDNLKVVAEGKRNLGAMNSKSADNKQ-----NQFQWQVVGKRNK 380