BLASTX nr result

ID: Coptis23_contig00031833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031833
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002339503.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|222836943|gb|EEE75336.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/113 (31%), Positives = 56/113 (49%)
 Frame = +1

Query: 16  RTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCPKN 195
           R SYARVCVEID S    +   +   +   + I  EY W P++CS C+VFGHT + CP N
Sbjct: 105 RLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSDCNVFGHTTALCPNN 164

Query: 196 TNLARDPRNTVWLKKETKGEVKQGEAGKTSVEVQEVHVIDKEAEWEIPRKKHR 354
                   N   LK   +G+   G     S + ++      + +W++  K+++
Sbjct: 165 --------NIDNLKVVAEGKSNLGAMNSKSADNKQ-----NQFQWQVVGKRNK 204


>ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|222874876|gb|EEF12007.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
 Frame = +1

Query: 10  KTRTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCP 189
           + R SYARVCVEID S    +   +   +   + I  EY W P++CS+C+VFGHT + C 
Sbjct: 144 RVRLSYARVCVEIDASKTLVKEYDLCCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 203

Query: 190 KNT--NL---ARDPRNTVWLKKE--------TKGEVKQGEAGKTSVEVQEVHVIDKEAEW 330
            N   NL   A D RN    + E         + ++KQ +   ++   Q++  +  + + 
Sbjct: 204 TNNIDNLKVVAEDVRNAACHEDENPSSPLVLNREDMKQEQGAASTALDQDMDAMGGDTDG 263

Query: 331 E 333
           E
Sbjct: 264 E 264


>ref|XP_002339503.1| predicted protein [Populus trichocarpa] gi|222875281|gb|EEF12412.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/115 (30%), Positives = 57/115 (49%)
 Frame = +1

Query: 10  KTRTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCP 189
           + R SYARVCVEID S    +   +   +   + I  EY W P++CS+C+VFGHT + C 
Sbjct: 22  RKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 81

Query: 190 KNTNLARDPRNTVWLKKETKGEVKQGEAGKTSVEVQEVHVIDKEAEWEIPRKKHR 354
            N        N   LK   +G+   G     S + ++      + +W++  K+++
Sbjct: 82  TN--------NIDNLKVVAEGKRNLGAMNSKSADNKQ-----NQFQWQVVGKRNK 123


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/115 (30%), Positives = 57/115 (49%)
 Frame = +1

Query: 10  KTRTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCP 189
           + R SYARVCVEID S    +   +   +   + I  EY W P++CS+C+VFGHT + C 
Sbjct: 279 RKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 338

Query: 190 KNTNLARDPRNTVWLKKETKGEVKQGEAGKTSVEVQEVHVIDKEAEWEIPRKKHR 354
            N        N   LK   +G+   G     S + ++      + +W++  K+++
Sbjct: 339 TN--------NIDNLKVVAEGKRNLGAMNSKSADNKQ-----NQFQWQVVGKRNK 380


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/115 (30%), Positives = 57/115 (49%)
 Frame = +1

Query: 10  KTRTSYARVCVEIDTSCKYPEGVPIVIDDRRRLGIEFEYNWKPARCSHCDVFGHTDSKCP 189
           + R SYARVCVEID S    +   +   +   + I  EY W P++CS+C+VFGHT + C 
Sbjct: 279 RKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 338

Query: 190 KNTNLARDPRNTVWLKKETKGEVKQGEAGKTSVEVQEVHVIDKEAEWEIPRKKHR 354
            N        N   LK   +G+   G     S + ++      + +W++  K+++
Sbjct: 339 TN--------NIDNLKVVAEGKRNLGAMNSKSADNKQ-----NQFQWQVVGKRNK 380


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