BLASTX nr result

ID: Coptis23_contig00031816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031816
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO86797.1| cyclin [Camellia sinensis]                              91   7e-17
ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223...    89   4e-16
ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]            88   6e-16
emb|CBI19854.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002312806.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16

>gb|AEO86797.1| cyclin [Camellia sinensis]
          Length = 439

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/54 (79%), Positives = 47/54 (87%)
 Frame = +2

Query: 2   YTNYSEDELLECSRMMVTLHQNAETGKLTGVHRKYSLSKYGYAAKFEPALFLLE 163
           +T YSE++LLECSR+MVT HQ A TGKLTGVHRKYS SKYGYAAK EPA FLLE
Sbjct: 383 HTKYSENQLLECSRLMVTFHQKAGTGKLTGVHRKYSTSKYGYAAKSEPAYFLLE 436


>ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223551376|gb|EEF52862.1|
           cyclin B, putative [Ricinus communis]
          Length = 438

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/56 (71%), Positives = 50/56 (89%)
 Frame = +2

Query: 2   YTNYSEDELLECSRMMVTLHQNAETGKLTGVHRKYSLSKYGYAAKFEPALFLLEAR 169
           YT+YSE++LLECSR+MV  HQNA +GKLTGVHRKYS+SK+G+AA+ EPA FLL+ R
Sbjct: 382 YTSYSEEQLLECSRLMVKFHQNAGSGKLTGVHRKYSVSKFGFAARTEPANFLLDTR 437


>ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]
          Length = 437

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/57 (70%), Positives = 48/57 (84%)
 Frame = +2

Query: 2   YTNYSEDELLECSRMMVTLHQNAETGKLTGVHRKYSLSKYGYAAKFEPALFLLEARP 172
           YT Y+E++LLECSR+MV+ HQ A TGKLTGVHRKYS SK+G+ AK EPA FL+E RP
Sbjct: 380 YTRYTEEQLLECSRLMVSFHQQAGTGKLTGVHRKYSTSKFGHTAKSEPAHFLVEERP 436


>emb|CBI19854.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/57 (70%), Positives = 48/57 (84%)
 Frame = +2

Query: 2   YTNYSEDELLECSRMMVTLHQNAETGKLTGVHRKYSLSKYGYAAKFEPALFLLEARP 172
           YT Y+E++LLECSR+MV+ HQ A TGKLTGVHRKYS SK+G+ AK EPA FL+E RP
Sbjct: 384 YTRYTEEQLLECSRLMVSFHQQAGTGKLTGVHRKYSTSKFGHTAKSEPAHFLVEERP 440


>ref|XP_002312806.1| predicted protein [Populus trichocarpa] gi|222849214|gb|EEE86761.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/53 (77%), Positives = 47/53 (88%)
 Frame = +2

Query: 2   YTNYSEDELLECSRMMVTLHQNAETGKLTGVHRKYSLSKYGYAAKFEPALFLL 160
           +T+Y+ED+LLECSRMMV+ HQ A  GKLTGVHRKYS SK+GYAAK EPALFLL
Sbjct: 345 HTSYTEDQLLECSRMMVSFHQKAGYGKLTGVHRKYSTSKFGYAAKAEPALFLL 397


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