BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031787
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com...    49   2e-10
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...    51   3e-10
emb|CBI24843.3| unnamed protein product [Vitis vinifera]               51   3e-10
ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|2...    45   6e-07
gb|ADE75737.1| unknown [Picea sitchensis]                              47   9e-07

>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 774

 Score = 48.5 bits (114), Expect(2) = 2e-10
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
 Frame = +1

Query: 73  EKIMFPEVPI--------LLGVVRIYSKKVEFLLQGCNEFRNYVVTASAELQQINLPEGL 228
           ++IMFPEVPI        LLGVVRIYSKKV+FL   CN     +  A   + ++NLPE  
Sbjct: 42  DRIMFPEVPIALRMSGHLLLGVVRIYSKKVDFLYHDCNVVLVGLRKAFTSI-EVNLPENA 100

Query: 229 ILSLCQRISI 258
             +  + +++
Sbjct: 101 TTAKFESVTL 110



 Score = 41.2 bits (95), Expect(2) = 2e-10
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +2

Query: 365 DNHLRTIEEITMTDQIPGDADPYIPI 442
           DNH+R+ EEIT+ DQIP D DPY+ I
Sbjct: 132 DNHMRSQEEITLQDQIPTDRDPYVVI 157


>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score = 50.8 bits (120), Expect(2) = 3e-10
 Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
 Frame = +1

Query: 73  EKIMFPEVPI--------LLGVVRIYSKKVEFLLQGCNEFRNYVVTASAELQQINLPE 222
           E+IMFPEVPI        LLGVVRIYSKKV++L Q CN     +  A + + ++NLPE
Sbjct: 42  ERIMFPEVPIALRMSGHLLLGVVRIYSKKVDYLYQDCNIVLIGIRKAFSSI-EVNLPE 98



 Score = 38.5 bits (88), Expect(2) = 3e-10
 Identities = 21/39 (53%), Positives = 22/39 (56%)
 Frame = +2

Query: 326 LGLAICIYYVRVQDNHLRTIEEITMTDQIPGDADPYIPI 442
           L L    Y     D HLR  EEIT+TDQIP   DPYI I
Sbjct: 119 LDLDADFYVEGALDMHLRAQEEITLTDQIPIGRDPYIAI 157


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score = 50.8 bits (120), Expect(2) = 3e-10
 Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
 Frame = +1

Query: 73  EKIMFPEVPI--------LLGVVRIYSKKVEFLLQGCNEFRNYVVTASAELQQINLPE 222
           E+IMFPEVPI        LLGVVRIYSKKV++L Q CN     +  A + + ++NLPE
Sbjct: 42  ERIMFPEVPIALRMSGHLLLGVVRIYSKKVDYLYQDCNIVLIGIRKAFSSI-EVNLPE 98



 Score = 38.5 bits (88), Expect(2) = 3e-10
 Identities = 21/39 (53%), Positives = 22/39 (56%)
 Frame = +2

Query: 326 LGLAICIYYVRVQDNHLRTIEEITMTDQIPGDADPYIPI 442
           L L    Y     D HLR  EEIT+TDQIP   DPYI I
Sbjct: 119 LDLDADFYVEGALDMHLRAQEEITLTDQIPIGRDPYIAI 157


>ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|222846910|gb|EEE84457.1|
           predicted protein [Populus trichocarpa]
          Length = 818

 Score = 45.1 bits (105), Expect(2) = 6e-07
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
 Frame = +1

Query: 73  EKIMFPEVPI--------LLGVVRIYSKKVEFLLQGCNEFRNYVVTASAELQQINLPEGL 228
           ++IMFPEVPI        LLGVVRIY KKV++L Q C       +  +    ++NLPE  
Sbjct: 42  DRIMFPEVPIALRMSSHLLLGVVRIYKKKVDYLFQDCT-VALAGLNKAFTTTEVNLPENA 100

Query: 229 ILSLCQRISI 258
             +  + I++
Sbjct: 101 TTATFESITL 110



 Score = 33.1 bits (74), Expect(2) = 6e-07
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +2

Query: 347 YYVRVQDNHLRTIEEITMTDQIPGDADPYIPI 442
           + VR  DNHL++ EEIT+ DQI     PYI I
Sbjct: 130 FVVRSPDNHLKSYEEITIPDQI----SPYITI 157


>gb|ADE75737.1| unknown [Picea sitchensis]
          Length = 678

 Score = 46.6 bits (109), Expect(3) = 9e-07
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
 Frame = +1

Query: 73  EKIMFPEVPI--------LLGVVRIYSKKVEFLLQGCNEFRNYVVTASAELQQINLPEG 225
           + IMFPEVPI        LLGVVRIYSKKV +L Q C++    +  A   + Q++LP G
Sbjct: 42  DSIMFPEVPIALRLSGHLLLGVVRIYSKKVNYLYQDCSDALAKIKQAFNSV-QVDLPPG 99



 Score = 25.8 bits (55), Expect(3) = 9e-07
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 15/45 (33%)
 Frame = +2

Query: 359 VQDNHLRTIEEITMT---------------DQIPGDADPYIPIFL 448
           + D H+ T ++IT++               +Q+PG  DPY  I+L
Sbjct: 127 IPDMHVTTRDQITLSHWPQGFDARPHFGPDEQVPGRVDPYTMIYL 171



 Score = 24.3 bits (51), Expect(3) = 9e-07
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 234 ITLPENFDFDD 266
           ITLPE F+FDD
Sbjct: 108 ITLPETFEFDD 118