BLASTX nr result

ID: Coptis23_contig00031784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031784
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242...   137   9e-31
ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003630439.1| hypothetical protein MTR_8g095540 [Medicago ...   128   5e-28
ref|XP_002511060.1| conserved hypothetical protein [Ricinus comm...   126   2e-27
emb|CBI20562.3| unnamed protein product [Vitis vinifera]              124   8e-27

>ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242180 [Vitis vinifera]
           gi|297738488|emb|CBI27733.3| unnamed protein product
           [Vitis vinifera]
          Length = 646

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/141 (48%), Positives = 96/141 (68%)
 Frame = +2

Query: 23  MVLLCFXXXXXXXXXXXXKEIKQCLLQLANLYAISKSEIHRKDKIGICYIHRNRVTYSNE 202
           M +LCF            +++KQ LLQLAN YAIS     R D+IG+CY+  NR++ SNE
Sbjct: 1   MAVLCFLLDLLSISPPLLRDLKQALLQLANFYAISP---WRHDRIGLCYLLYNRISSSNE 57

Query: 203 LKIVYSPRGGDFSLRDFHHAVSNIPSDAYLPDSGVSAASIDGGDVALEKLFTEELLYSWG 382
           LKI YSPR  +F LRDFHHAV+++P+D + P +G S   I   D+ L  + ++E+LYSWG
Sbjct: 58  LKIAYSPRE-NFGLRDFHHAVNSLPTDVFFPQTGHSGP-ISSADLHLSTILSDEVLYSWG 115

Query: 383 GKDIVKKVIFIGSCILKDVDS 445
           GKDIV+K+I + SC ++++DS
Sbjct: 116 GKDIVRKIILLSSCFVQNIDS 136


>ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|222868767|gb|EEF05898.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 4/148 (2%)
 Frame = +2

Query: 23  MVLLCFXXXXXXXXXXXXKEIKQCLLQLANLYAISKSEIHRK----DKIGICYIHRNRVT 190
           MVL+CF            K +KQ LL LAN YA+S     +     DKIG+CY+ ++R +
Sbjct: 1   MVLVCFVLDLCNLSPPLLKNLKQSLLHLANFYAVSSPSRRQSHSLIDKIGLCYLLKHRTS 60

Query: 191 YSNELKIVYSPRGGDFSLRDFHHAVSNIPSDAYLPDSGVSAASIDGGDVALEKLFTEELL 370
            S+ELKI YSPRG +F+L DFHHAV+N+P+D++LP+   S  S+   DV L  + ++++L
Sbjct: 61  LSHELKIGYSPRG-NFNLCDFHHAVNNVPTDSFLPEINDSG-SLRSFDVKLSSILSDQVL 118

Query: 371 YSWGGKDIVKKVIFIGSCILKDVDSVRK 454
           YSWGGKDI++KVI + SC+  ++D+  K
Sbjct: 119 YSWGGKDIMRKVIVLSSCVPDNIDTELK 146


>ref|XP_003630439.1| hypothetical protein MTR_8g095540 [Medicago truncatula]
           gi|355524461|gb|AET04915.1| hypothetical protein
           MTR_8g095540 [Medicago truncatula]
          Length = 478

 Score =  128 bits (321), Expect = 5e-28
 Identities = 70/148 (47%), Positives = 95/148 (64%), Gaps = 6/148 (4%)
 Frame = +2

Query: 23  MVLLCFXXXXXXXXXXXXKEIKQCLLQLANLYAISKSEIHRK------DKIGICYIHRNR 184
           MV LCF             ++KQ LLQLAN YAIS S +  +      DKIG+CY+ +NR
Sbjct: 1   MVQLCFVLDLRTLAPPLLGDLKQSLLQLANFYAISNSSLSSRKSDTLSDKIGLCYVVKNR 60

Query: 185 VTYSNELKIVYSPRGGDFSLRDFHHAVSNIPSDAYLPDSGVSAASIDGGDVALEKLFTEE 364
           ++ S+EL I Y P G +F+LRDFHHAV+N+PSDA+LPD      ++ G DV +  + +E 
Sbjct: 61  LSSSDELMIAYRPVG-NFNLRDFHHAVNNLPSDAFLPD----IDTVSGADVMISDVLSER 115

Query: 365 LLYSWGGKDIVKKVIFIGSCILKDVDSV 448
           +LYSW GKDI +KVI I S + +DV+ V
Sbjct: 116 VLYSWQGKDIERKVIVITSILPEDVNFV 143


>ref|XP_002511060.1| conserved hypothetical protein [Ricinus communis]
           gi|223550175|gb|EEF51662.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 653

 Score =  126 bits (316), Expect = 2e-27
 Identities = 68/149 (45%), Positives = 96/149 (64%), Gaps = 5/149 (3%)
 Frame = +2

Query: 23  MVLLCFXXXXXXXXXXXXKEIKQCLLQLANLYAISK-SEIHR----KDKIGICYIHRNRV 187
           MV LCF            +++KQCLLQL N YAIS  S  HR     D+IG+CYI +NR+
Sbjct: 1   MVALCFVLDLCSLSPSLLRDLKQCLLQLGNSYAISPPSSRHRFDSLGDRIGLCYIFKNRI 60

Query: 188 TYSNELKIVYSPRGGDFSLRDFHHAVSNIPSDAYLPDSGVSAASIDGGDVALEKLFTEEL 367
           + S ELKI Y PR G+F LRDFH AV+N+P+DA+LP+   S A +   D  L  + ++++
Sbjct: 61  SSSRELKIAYHPR-GNFHLRDFHDAVNNLPTDAFLPEIDDSGA-LRRSDAKLSSVLSDQV 118

Query: 368 LYSWGGKDIVKKVIFIGSCILKDVDSVRK 454
           +YSW  KD ++KVI + SC+ +++DS  K
Sbjct: 119 VYSWEIKDFMRKVIVLSSCLPENIDSALK 147


>emb|CBI20562.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score =  124 bits (311), Expect = 8e-27
 Identities = 69/144 (47%), Positives = 94/144 (65%)
 Frame = +2

Query: 23  MVLLCFXXXXXXXXXXXXKEIKQCLLQLANLYAISKSEIHRKDKIGICYIHRNRVTYSNE 202
           M +LCF            +++KQ LLQLAN YAIS     R D+IG+CY++ NR++ SN 
Sbjct: 1   MAVLCFLLDLLSISPPLLRDLKQALLQLANFYAISP---WRHDRIGLCYLY-NRISSSNG 56

Query: 203 LKIVYSPRGGDFSLRDFHHAVSNIPSDAYLPDSGVSAASIDGGDVALEKLFTEELLYSWG 382
           LKI YSPR  +F LRDFHHAV+++P+D + P +G S   +   D+ L  + ++E+LYSWG
Sbjct: 57  LKIAYSPRE-NFGLRDFHHAVNSLPTDVFSPQTGHSRP-VSSVDLQLSTILSDEVLYSWG 114

Query: 383 GKDIVKKVIFIGSCILKDVDSVRK 454
           GKDIV+KVI + S  L D D  RK
Sbjct: 115 GKDIVRKVILLSS-RLHDADVARK 137


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