BLASTX nr result

ID: Coptis23_contig00031778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031778
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    59   4e-11
ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    49   1e-08
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    48   3e-08
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    48   7e-08
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    46   1e-07

>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 59.3 bits (142), Expect(2) = 4e-11
 Identities = 25/82 (30%), Positives = 51/82 (62%)
 Frame = -3

Query: 783 LLVASTMGKPLFMDKAIEGKQMLSFARVCIEISAEKDLPSSLKIKVSSNKVNFIPLEFT* 604
           ++VAS +GKPL +D A + +  LS+AR+C+E++ +  +P  + + +   +   +P+ +  
Sbjct: 71  VVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITVNLRGEEF-IVPVTYEW 129

Query: 603 KPLICIDCQMFGHNKAGCERQL 538
           KP  C  C  FGH+++ C +++
Sbjct: 130 KPRKCNLCHSFGHSQSTCPKKI 151



 Score = 35.4 bits (80), Expect(2) = 4e-11
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -2

Query: 916 GKLFVIRPWTREVEDNRGSIQNVHIWVKFFNVPKQLWNKKGLSLLVS 776
           GK  ++R WT  +        +V +W+K   +P +LW   GL ++ S
Sbjct: 29  GKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIPLELWTDAGLVVVAS 75


>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 48.9 bits (115), Expect(2) = 1e-08
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = -3

Query: 777 VASTMGKPLFMDKAIEGKQMLSFARVCIEISAEKDLPSSLKIKVSSNKVNFIPLEFT*KP 598
           + S +G+PLF D     ++ L FARVC+E+  +K LP S+ I+          +E+  +P
Sbjct: 147 IVSLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSITIEDDKGYSYDQKVEYEWQP 206

Query: 597 LI-CIDCQMFGHNKAGCERQ 541
              C  C  FGH+ + C R+
Sbjct: 207 TSRCSFCLHFGHSDS-CPRR 225



 Score = 37.4 bits (85), Expect(2) = 1e-08
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = -2

Query: 913 KLFVIRPWTREVEDNRGSIQNVHIWVKFFNVPKQLWNKKGLSLLVS 776
           K F+++PW+R++      +++  IW+K  N+   LW+ + L  +VS
Sbjct: 104 KPFILKPWSRDMSLEIEELKSAPIWIKLPNLRLHLWSPEALGKIVS 149


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = -3

Query: 777 VASTMGKPLFMDKAIEGKQMLSFARVCIEISAEKDLPSSLKIKVSSNKVNFIPLEFT*KP 598
           +AS +G+PLF D     ++ L FARVC+E+  +K LP S+ I+          +E+  +P
Sbjct: 147 IASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEWQP 206

Query: 597 LI-CIDCQMFGHNKAGCERQ 541
              C  C   GH+ + C R+
Sbjct: 207 TSRCSYCLHLGHSDS-CPRR 225



 Score = 37.0 bits (84), Expect(2) = 3e-08
 Identities = 13/46 (28%), Positives = 28/46 (60%)
 Frame = -2

Query: 913 KLFVIRPWTREVEDNRGSIQNVHIWVKFFNVPKQLWNKKGLSLLVS 776
           K F+++PW+R++      +++  +W+K  N+   LW+ + LS + S
Sbjct: 104 KPFILKPWSRDLSLEIKELKSAPVWIKLPNLRLHLWSPEALSKIAS 149


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 47.8 bits (112), Expect(2) = 7e-08
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = -3

Query: 777 VASTMGKPLFMDKAIEGKQMLSFARVCIEISAEKDLPSSLKIKVSSNKVNFIPLEFT*KP 598
           +AS +G+PLF D     ++ L FARVC+E+  +K LP S+ I+          +E+  +P
Sbjct: 147 IASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEWQP 206

Query: 597 LI-CIDCQMFGHNKAGCERQ 541
              C  C   GH+ + C R+
Sbjct: 207 TSRCSYCLHLGHSDS-CPRR 225



 Score = 35.8 bits (81), Expect(2) = 7e-08
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = -2

Query: 913 KLFVIRPWTREVEDNRGSIQNVHIWVKFFNVPKQLWNKKGLSLLVS 776
           K F+++PW+R++      +++  IW+K  N+   LW+ + L  + S
Sbjct: 104 KPFILKPWSRDLSLEIKELKSAPIWIKLPNLRLHLWSPEALGKIAS 149


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 46.2 bits (108), Expect(2) = 1e-07
 Identities = 23/72 (31%), Positives = 40/72 (55%)
 Frame = -3

Query: 777 VASTMGKPLFMDKAIEGKQMLSFARVCIEISAEKDLPSSLKIKVSSNKVNFIPLEFT*KP 598
           VAS +G+PL  D+   G + L +AR+C+E+ A        K++ S+  +  + + +  KP
Sbjct: 56  VASMVGQPLSCDELTLGCKRLDYARLCVEVDASLPFVHKFKLEFSTT-IREVHVNYEWKP 114

Query: 597 LICIDCQMFGHN 562
             C  C +FGH+
Sbjct: 115 KRCERCPVFGHS 126



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = -2

Query: 916 GKLFVIRPWTREVEDNRGSIQNVHIWVKFFNVPKQLWNKKGLSLLVS 776
           GK  +++ W      +   I  + +W++ +++P  LW K+GLS + S
Sbjct: 12  GKAIILQKWHSGFVFDMNMITKIPVWIRIYDLPFPLWTKEGLSEVAS 58


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