BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031736
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    92   7e-17
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   1e-14
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    82   7e-14
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   9e-14

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/144 (34%), Positives = 80/144 (55%)
 Frame = -3

Query: 514 EVDHSGMEITWCNNQKGLRRIVSKIDRMFISNAWTTKYTGWRYKVLRRINSDHSPLVGEY 335
           ++ +SGM  TW +NQ     I+ K+DR+ ++  W  K+     + L    SDHSP+V + 
Sbjct: 553 DLRYSGMHYTW-SNQCPENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKV 611

Query: 334 VFIPRPRNLPFRFNKCWTNHPSFMELVGSSWSQHIGGTPMTRLMKKLHRLKNDLKCWNIA 155
           +   + +  PFRF   W +H  FM LV   W Q+  G PM +L  KL +LK +LK +N+A
Sbjct: 612 IGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMA 671

Query: 154 VFGNVEHNIEKAQIEFNEAQTRVY 83
            F N+   +  A+ + ++AQ  ++
Sbjct: 672 HFSNISDRVRDAKNKMDKAQQALH 695


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 91.7 bits (226), Expect = 7e-17
 Identities = 49/141 (34%), Positives = 77/141 (54%)
 Frame = -3

Query: 505 HSGMEITWCNNQKGLRRIVSKIDRMFISNAWTTKYTGWRYKVLRRINSDHSPLVGEYVFI 326
           +SGM  TW +NQ     I+ K+DR+ ++  W   +     + L    SDHSP+V + +  
Sbjct: 179 YSGMHYTW-SNQCPENLIMRKLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGN 237

Query: 325 PRPRNLPFRFNKCWTNHPSFMELVGSSWSQHIGGTPMTRLMKKLHRLKNDLKCWNIAVFG 146
            +    PFRF   W +H  FM LV   W Q+ GG PM +L  KL + K +LK +N+A F 
Sbjct: 238 DQNIKKPFRFFDMWMDHDEFMPLVKKVWDQNSGGCPMYQLCCKLRKQKQELKLFNMAHFS 297

Query: 145 NVEHNIEKAQIEFNEAQTRVY 83
           N+   ++ A+ E ++AQ  ++
Sbjct: 298 NISDRVKDAKNEMDKAQQALH 318


>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
 Frame = -3

Query: 523 NLLEVDHSGMEITWCNNQKGLRRIVSKIDRMFISNAWTTKYTGWRYKVLRRINSDHSPLV 344
           +L+E+  S    TW + Q       SK+DR+ ++  W + +   +  +LRR  SDH PL+
Sbjct: 172 HLMEISASDGWFTWFSGQAK-----SKLDRLLVNPEWVSLFPSLQVSILRRNLSDHCPLL 226

Query: 343 ---GEYVFIPRPRNLPFRFNKCWTNHPSFMELVGSSWSQHIGGTPMTRLMKKLHRLKNDL 173
               E  + PRP    FRF  CW +HP  ++++   W+ H  G     L  KL   K  L
Sbjct: 227 VKSDELNWGPRP----FRFQNCWLSHPGCLQIIKDVWASHTSG----NLTDKLKETKKRL 278

Query: 172 KCWNIAVFGNVEHNIEKAQ 116
           K WN + FG+++ NIE+ +
Sbjct: 279 KIWNSSEFGHIDRNIEELE 297


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
 Frame = -3

Query: 499 GMEITWCNNQKGLRRIVSKIDRMFISNAW-----TTKYTGWRYKVLRRINSDHSPLVGEY 335
           G   TW N + G   +  ++DR   +  W     ++  +      L R  SDH PL+   
Sbjct: 177 GAFYTWSNGRLGSDNVALRLDRAICNEEWVNFWRSSSCSALGNSALVRHQSDHHPLLMSM 236

Query: 334 VFIPRPRNLPFRFNKCWTNHPSFMELVGSSWSQHIGGTPMTRLMKKLHRLKNDLKCWNIA 155
            F    R+  F+F K WT H     +V  +WS+H  G  MTRL  KL  +K   + WN  
Sbjct: 237 DFCTSQRSGNFKFFKTWTEHEDCRRIVAENWSKHTRGHGMTRLQAKLKHMKQVFRHWNRT 296

Query: 154 VFGNVEHNIEKAQIEFNEAQ 95
           VFG+V+  +  A  E N  Q
Sbjct: 297 VFGDVDRKVRMAVEEVNRIQ 316


>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 81.3 bits (199), Expect = 9e-14
 Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = -3

Query: 448 SKIDRMFISNAWTTKYTGWRYKVLRRINSDHSPLV-GEYVFIPRPRNLPFRFNKCWTNHP 272
           SK+DR F++  W T Y   +  +L R  SDH PL+    V    P+  PF+F  CW + P
Sbjct: 192 SKLDRCFVNPEWLTHYPTLKLSLLNRGLSDHCPLLLNSSVRNWGPK--PFKFQNCWLSDP 249

Query: 271 SFMELVGSSWSQHIGGTPMTRLMKKLHRLKNDLKCWNIAVFGNVEHNIEKAQIEFNE 101
             M LV  +W +    +PM  L++KL  +K DLK WN  VFGN+E NI++ + E N+
Sbjct: 250 RCMRLVKDTWQK---SSPMG-LVQKLKTVKKDLKDWNEKVFGNIEANIKQLEHEINQ 302