BLASTX nr result

ID: Coptis23_contig00031735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031735
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279408.1| PREDICTED: protein argonaute 10-like [Vitis ...   330   2e-88
ref|XP_002312555.1| argonaute protein group [Populus trichocarpa...   310   2e-82
ref|XP_002517060.1| eukaryotic translation initiation factor 2c,...   309   4e-82
emb|CBI26319.3| unnamed protein product [Vitis vinifera]              305   7e-81
ref|XP_004134114.1| PREDICTED: protein argonaute 10-like [Cucumi...   303   2e-80

>ref|XP_002279408.1| PREDICTED: protein argonaute 10-like [Vitis vinifera]
          Length = 995

 Score =  330 bits (845), Expect = 2e-88
 Identities = 162/222 (72%), Positives = 183/222 (82%)
 Frame = +2

Query: 2   PPTKNXXXXXXXXXXKSDQNDIPMRPSSRPCTIVDKSVSAHPVQAQPVENRTGSLENGGH 181
           P +KN          KSDQ+D+ MRPSSRPCT+ DK V AH       +   G +ENGG+
Sbjct: 56  PSSKNRGRRRGRGGRKSDQSDVFMRPSSRPCTVADKPVLAHQAGPLVTDIPHGCVENGGN 115

Query: 182 VCEMDMGFPTSSKSLRFAPRPGFGQAGTKCIVKANHFFAQLPEKDLNQYDVTITPEVVSR 361
           +CEM+MGFP+SSKSL FAPRPG+GQ GTKCIVKANHFF +LPEKDLNQYDVTITPEV SR
Sbjct: 116 MCEMEMGFPSSSKSLTFAPRPGYGQLGTKCIVKANHFFTELPEKDLNQYDVTITPEVSSR 175

Query: 362 SMNRTIMAELVKLYKESDLGMRLPAYDGRKCLYTAGELPFISREFSIKIVGEDDGINGHK 541
           ++NR IM ELVKLYKESDLGMRLPAYDGRK LYTAGELPF  +EF +K+V E+DGING K
Sbjct: 176 TVNRAIMNELVKLYKESDLGMRLPAYDGRKSLYTAGELPFAWKEFKVKLVDEEDGINGPK 235

Query: 542 RERDYKVVIKFAARANMHHLGQFLAGKRADAPQEALQILDIV 667
           RER+YKVVIKF ARA++HHLGQFLAGKRADAPQEALQILDIV
Sbjct: 236 REREYKVVIKFVARASLHHLGQFLAGKRADAPQEALQILDIV 277


>ref|XP_002312555.1| argonaute protein group [Populus trichocarpa]
           gi|222852375|gb|EEE89922.1| argonaute protein group
           [Populus trichocarpa]
          Length = 996

 Score =  310 bits (794), Expect = 2e-82
 Identities = 158/224 (70%), Positives = 176/224 (78%), Gaps = 2/224 (0%)
 Frame = +2

Query: 2   PPTKNXXXXXXXXXXKSDQNDIPMRPSSRPCTIVDKSVSAHPVQAQPVENRTGSLENGGH 181
           PP KN          KSDQ D+  RPSSRPCT+  K V  +P          G +EN  +
Sbjct: 58  PPAKNRGRRRGRGGRKSDQGDVCTRPSSRPCTVAHKPV-LNPTGDLLANASNGHIENSKN 116

Query: 182 VCEMDMG--FPTSSKSLRFAPRPGFGQAGTKCIVKANHFFAQLPEKDLNQYDVTITPEVV 355
           VCEM+MG  FPTSSKSL  APRPG+GQ GTKCIVKANHF A+LP+KDLNQYDVTITPEV 
Sbjct: 117 VCEMEMGLGFPTSSKSLSLAPRPGYGQVGTKCIVKANHFLAELPDKDLNQYDVTITPEVA 176

Query: 356 SRSMNRTIMAELVKLYKESDLGMRLPAYDGRKCLYTAGELPFISREFSIKIVGEDDGING 535
           SR+MNR IMAELV+LYK+SDLGMRLPAYDGRK LYTAGELPF  +EF IK++ E+DGING
Sbjct: 177 SRTMNRDIMAELVRLYKDSDLGMRLPAYDGRKSLYTAGELPFAWKEFIIKLIDEEDGING 236

Query: 536 HKRERDYKVVIKFAARANMHHLGQFLAGKRADAPQEALQILDIV 667
            KR R+YKVVIKF ARANM+HLGQFLAGKRADAPQEALQILDIV
Sbjct: 237 PKRGREYKVVIKFVARANMYHLGQFLAGKRADAPQEALQILDIV 280


>ref|XP_002517060.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223543695|gb|EEF45223.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 986

 Score =  309 bits (791), Expect = 4e-82
 Identities = 161/230 (70%), Positives = 178/230 (77%), Gaps = 8/230 (3%)
 Frame = +2

Query: 2   PPTKNXXXXXXXXXXKSDQNDIPMRPSSRPCTIVDKSVSAHPVQAQPVENRTGSL----- 166
           PPTKN          KSDQ D+  RPSSRPCT+V K V           N+ G L     
Sbjct: 57  PPTKNRGRRRGRGGRKSDQGDVFTRPSSRPCTVVHKPV-----------NQAGGLLANAP 105

Query: 167 -ENGGHVCEMDMG--FPTSSKSLRFAPRPGFGQAGTKCIVKANHFFAQLPEKDLNQYDVT 337
             N G++CEM+MG  FPTSSKSL +A RPG+GQ GTKCIVKANHFFA+L +KDLNQYDVT
Sbjct: 106 NGNSGNICEMEMGLGFPTSSKSLTYARRPGYGQLGTKCIVKANHFFAELLDKDLNQYDVT 165

Query: 338 ITPEVVSRSMNRTIMAELVKLYKESDLGMRLPAYDGRKCLYTAGELPFISREFSIKIVGE 517
           ITPEV SR+ NR IMAELV+LYKESDLGMRLPAYDGRK LYT+GELPF  +EF IK+V E
Sbjct: 166 ITPEVASRTTNRAIMAELVRLYKESDLGMRLPAYDGRKSLYTSGELPFAWKEFIIKLVDE 225

Query: 518 DDGINGHKRERDYKVVIKFAARANMHHLGQFLAGKRADAPQEALQILDIV 667
           DDG+NG KRER+YKVVIKF ARANMHHLGQFLAGKRADAPQEALQILDIV
Sbjct: 226 DDGVNGPKREREYKVVIKFVARANMHHLGQFLAGKRADAPQEALQILDIV 275


>emb|CBI26319.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score =  305 bits (780), Expect = 7e-81
 Identities = 157/222 (70%), Positives = 174/222 (78%)
 Frame = +2

Query: 2   PPTKNXXXXXXXXXXKSDQNDIPMRPSSRPCTIVDKSVSAHPVQAQPVENRTGSLENGGH 181
           P +KN          KSDQ+D+ MRPSSRPCT+ DK V AH  QA P+            
Sbjct: 56  PSSKNRGRRRGRGGRKSDQSDVFMRPSSRPCTVADKPVLAH--QAGPL------------ 101

Query: 182 VCEMDMGFPTSSKSLRFAPRPGFGQAGTKCIVKANHFFAQLPEKDLNQYDVTITPEVVSR 361
                MGFP+SSKSL FAPRPG+GQ GTKCIVKANHFF +LPEKDLNQYDVTITPEV SR
Sbjct: 102 -----MGFPSSSKSLTFAPRPGYGQLGTKCIVKANHFFTELPEKDLNQYDVTITPEVSSR 156

Query: 362 SMNRTIMAELVKLYKESDLGMRLPAYDGRKCLYTAGELPFISREFSIKIVGEDDGINGHK 541
           ++NR IM ELVKLYKESDLGMRLPAYDGRK LYTAGELPF  +EF +K+V E+DGING K
Sbjct: 157 TVNRAIMNELVKLYKESDLGMRLPAYDGRKSLYTAGELPFAWKEFKVKLVDEEDGINGPK 216

Query: 542 RERDYKVVIKFAARANMHHLGQFLAGKRADAPQEALQILDIV 667
           RER+YKVVIKF ARA++HHLGQFLAGKRADAPQEALQILDIV
Sbjct: 217 REREYKVVIKFVARASLHHLGQFLAGKRADAPQEALQILDIV 258


>ref|XP_004134114.1| PREDICTED: protein argonaute 10-like [Cucumis sativus]
           gi|449523115|ref|XP_004168570.1| PREDICTED: protein
           argonaute 10-like [Cucumis sativus]
          Length = 984

 Score =  303 bits (777), Expect = 2e-80
 Identities = 153/222 (68%), Positives = 174/222 (78%)
 Frame = +2

Query: 2   PPTKNXXXXXXXXXXKSDQNDIPMRPSSRPCTIVDKSVSAHPVQAQPVENRTGSLENGGH 181
           PP+KN          KSDQ D+ MRPSSRPCT+  K           V +      NGG 
Sbjct: 53  PPSKNRGRRRSRGGRKSDQGDVFMRPSSRPCTVARKPDEPEFNAGAMVASTN---PNGGI 109

Query: 182 VCEMDMGFPTSSKSLRFAPRPGFGQAGTKCIVKANHFFAQLPEKDLNQYDVTITPEVVSR 361
           +  M MGF  SSKSL FAPRPGFGQ GTKCIVKANHFFA+LP+KDLNQYDVTITPEV SR
Sbjct: 110 ISGMQMGFRNSSKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASR 169

Query: 362 SMNRTIMAELVKLYKESDLGMRLPAYDGRKCLYTAGELPFISREFSIKIVGEDDGINGHK 541
           ++NR IMAELV+LY+ESDLG RLPAYDGRK LYTAGELPF+ +EF+IK+V E+DG++G K
Sbjct: 170 TVNRAIMAELVRLYRESDLGKRLPAYDGRKSLYTAGELPFVWKEFTIKLVDEEDGVSGPK 229

Query: 542 RERDYKVVIKFAARANMHHLGQFLAGKRADAPQEALQILDIV 667
           RER+YKV+IKF ARAN+HHLGQFLAGKRADAPQEALQILDIV
Sbjct: 230 REREYKVLIKFVARANLHHLGQFLAGKRADAPQEALQILDIV 271


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