BLASTX nr result

ID: Coptis23_contig00031706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031706
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625230.1| Receptor-like protein kinase [Medicago trunc...    65   6e-09
gb|ABN08638.1| Leucine-rich repeat, plant specific [Medicago tru...    65   7e-09
dbj|BAD09494.1| putative receptor-like protein kinase [Oryza sat...    64   2e-08
ref|XP_002887470.1| predicted protein [Arabidopsis lyrata subsp....    64   2e-08
ref|NP_001061927.1| Os08g0446400 [Oryza sativa Japonica Group] g...    64   2e-08

>ref|XP_003625230.1| Receptor-like protein kinase [Medicago truncatula]
           gi|355500245|gb|AES81448.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 1096

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/94 (41%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
 Frame = +3

Query: 159 FFDIIPLV----------FTLNANGVTXXXXXKHLT-VPPSIVSSWNSSDSTPCYWQGIH 305
           FF II L+          FTLN+ G+T      H T VPP I SSW +SDS PC W G+ 
Sbjct: 129 FFRIITLLLMIISFLHGGFTLNSYGLTLLSLLTHWTFVPPLINSSWKASDSDPCSWFGVQ 188

Query: 306 CDPKQXXXXXXXXXXXXXXXXGKEIGQLQHLEDI 407
           CD KQ                G EIG L HLE++
Sbjct: 189 CDRKQNLISLNLNSHEIFGQLGPEIGNLYHLENL 222


>gb|ABN08638.1| Leucine-rich repeat, plant specific [Medicago truncatula]
          Length = 300

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/76 (44%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +3

Query: 183 FTLNANGVTXXXXXKHLT-VPPSIVSSWNSSDSTPCYWQGIHCDPKQXXXXXXXXXXXXX 359
           FTLN+ G+T      H T VPP I SSW +SDS PC W G+ CD KQ             
Sbjct: 10  FTLNSYGLTLLSLLTHWTFVPPLINSSWKASDSDPCSWFGVQCDRKQNLISLNLNSHEIF 69

Query: 360 XXXGKEIGQLQHLEDI 407
              G EIG L HLE++
Sbjct: 70  GQLGPEIGNLYHLENL 85


>dbj|BAD09494.1| putative receptor-like protein kinase [Oryza sativa Japonica Group]
           gi|42409450|dbj|BAD09807.1| putative receptor-like
           protein kinase [Oryza sativa Japonica Group]
          Length = 1010

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/88 (32%), Positives = 47/88 (53%)
 Frame = +3

Query: 153 IFFFDIIPLVFTLNANGVTXXXXXKHLTVPPSIVSSWNSSDSTPCYWQGIHCDPKQXXXX 332
           +  F + PL  +L+A+G+      K L +P SI S+W++ D+TPC W+G+ CD       
Sbjct: 10  VVLFSLAPLCCSLSADGLALLDLAKTLILPSSISSNWSADDATPCTWKGVDCDEMSNVVS 69

Query: 333 XXXXXXXXXXXXGKEIGQLQHLEDIDLN 416
                       G +IG ++HL+ IDL+
Sbjct: 70  LNLSYSGLSGSLGPQIGLMKHLKVIDLS 97


>ref|XP_002887470.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333311|gb|EFH63729.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1122

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
 Frame = +3

Query: 141 LFFHIFFFDIIPLVFTLNANGVTXXXXXKHLT-VPPSIVSSW--NSSDSTPCYWQGIHCD 311
           LFF +F    I  V  LN++G+T     KHL  VPP + S+W  N+S++TPC W GI CD
Sbjct: 12  LFFCLFLSTHIVSVSCLNSDGLTLLSLLKHLDKVPPQVTSTWKINASEATPCNWFGITCD 71

Query: 312 PKQXXXXXXXXXXXXXXXXGKEIGQLQHLEDIDLN 416
             +                G EIG+L+ L+ +DL+
Sbjct: 72  DSKNVAALNFTRSKVSGQLGPEIGELKSLQILDLS 106


>ref|NP_001061927.1| Os08g0446400 [Oryza sativa Japonica Group]
           gi|113623896|dbj|BAF23841.1| Os08g0446400, partial
           [Oryza sativa Japonica Group]
          Length = 410

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/88 (32%), Positives = 47/88 (53%)
 Frame = +3

Query: 153 IFFFDIIPLVFTLNANGVTXXXXXKHLTVPPSIVSSWNSSDSTPCYWQGIHCDPKQXXXX 332
           +  F + PL  +L+A+G+      K L +P SI S+W++ D+TPC W+G+ CD       
Sbjct: 10  VVLFSLAPLCCSLSADGLALLDLAKTLILPSSISSNWSADDATPCTWKGVDCDEMSNVVS 69

Query: 333 XXXXXXXXXXXXGKEIGQLQHLEDIDLN 416
                       G +IG ++HL+ IDL+
Sbjct: 70  LNLSYSGLSGSLGPQIGLMKHLKVIDLS 97


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