BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031685
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...    96   2e-18
ref|XP_003558687.1| PREDICTED: transcription initiation factor I...    94   1e-17
ref|XP_002464670.1| hypothetical protein SORBIDRAFT_01g023100 [S...    93   2e-17
emb|CBI17573.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_003532609.1| PREDICTED: general transcription factor IIE ...    92   6e-17

>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   EERLSKFHKQQQKCISTLTSIRARAGSSN-AAQHRIEASATISDSVPARFSHAIKFSHDT 179
           +E L+KF KQQ+KC STLTSI A+AGSS      +   +A      PA     +KFS+DT
Sbjct: 4   QESLAKFKKQQEKCQSTLTSIAAKAGSSKPTVPQKFTPAAPTKPPTPA-----VKFSNDT 58

Query: 180 ARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPE 284
            RLQ INSIRK+PVG+QIKRVI LLL  R+AFTPE
Sbjct: 59  ERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPE 93


>ref|XP_003558687.1| PREDICTED: transcription initiation factor IIE subunit beta-like
           [Brachypodium distachyon]
          Length = 284

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/93 (55%), Positives = 64/93 (68%)
 Frame = +3

Query: 6   ERLSKFHKQQQKCISTLTSIRARAGSSNAAQHRIEASATISDSVPARFSHAIKFSHDTAR 185
           ERLSKF +QQ++C +TL+SI A   SS  +Q    +    + S PAR + AIKFS+DT R
Sbjct: 5   ERLSKFKQQQERCQTTLSSIAASQASSTKSQIAPRSKPANAPSAPARPTQAIKFSNDTER 64

Query: 186 LQQINSIRKSPVGSQIKRVIALLLVERKAFTPE 284
           LQ INS+RKSPVG+QIK VI LL   R AFT E
Sbjct: 65  LQHINSVRKSPVGAQIKLVIELLYKTRLAFTAE 97


>ref|XP_002464670.1| hypothetical protein SORBIDRAFT_01g023100 [Sorghum bicolor]
           gi|241918524|gb|EER91668.1| hypothetical protein
           SORBIDRAFT_01g023100 [Sorghum bicolor]
          Length = 273

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/94 (55%), Positives = 68/94 (72%)
 Frame = +3

Query: 3   EERLSKFHKQQQKCISTLTSIRARAGSSNAAQHRIEASATISDSVPARFSHAIKFSHDTA 182
           ++ LS+F +QQ++C S+LTSI A   S++  +HR  A    + SVPAR S +IKFS+DT 
Sbjct: 4   KDSLSRFKQQQERCQSSLTSIAANQTSASKPKHR--AQPINAPSVPARSSQSIKFSNDTE 61

Query: 183 RLQQINSIRKSPVGSQIKRVIALLLVERKAFTPE 284
           RLQ INSIRKSPVG+Q+K VI LL   R+AFT E
Sbjct: 62  RLQHINSIRKSPVGAQMKLVIELLYKTRQAFTAE 95


>emb|CBI17573.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   EERLSKFHKQQQKCISTLTSIRARAGSSN-AAQHRIEASATISDSVPARFSHAIKFSHDT 179
           +E L+KF KQQ+KC STLTSI A+A SS  +       +A      PA     +KFS+DT
Sbjct: 4   QESLAKFKKQQEKCQSTLTSIAAKAVSSKPSVPQNFTPAAPTKPPTPA-----VKFSNDT 58

Query: 180 ARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPE 284
            RLQ INSIRK+PVG+QIKRVI LLL  R+AFTPE
Sbjct: 59  ERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPE 93


>ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 280

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/94 (53%), Positives = 66/94 (70%)
 Frame = +3

Query: 3   EERLSKFHKQQQKCISTLTSIRARAGSSNAAQHRIEASATISDSVPARFSHAIKFSHDTA 182
           +ERL KF KQQ+KC +TL++I A   ++   +    ASA   ++ PA     +KFS+DT 
Sbjct: 4   QERLDKFKKQQEKCQTTLSTIAATKAAAATQKSATHASANGRNAAPA-----VKFSNDTE 58

Query: 183 RLQQINSIRKSPVGSQIKRVIALLLVERKAFTPE 284
           RLQ INSIRK+PVG+Q+KRVI LLL  R+AFTPE
Sbjct: 59  RLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPE 92