BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031682
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15206.3| unnamed protein product [Vitis vinifera]              103   2e-20
emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]   103   2e-20
ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|2...   101   1e-19
ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containi...    95   8e-18
ref|XP_003598017.1| Pentatricopeptide repeat-containing protein ...    94   2e-17

>emb|CBI15206.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  103 bits (258), Expect = 2e-20
 Identities = 48/83 (57%), Positives = 63/83 (75%)
 Frame = -1

Query: 587 LLGACRVHGNLELGERVRRHIAQLQVDHSGDYVLLSHMYANEGRWNDAFRTRQTMRGRQV 408
           LL ACRVHGNLEL E+VR+ + +L+ DHS DYVLL++MYA+ G+WN   R R++M  R V
Sbjct: 328 LLAACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKVVRVRKSMHIRGV 387

Query: 407 QKPKPGNSLVDPQPAMMMMQESS 339
           QKPKPGNS +  QP+M +  ES+
Sbjct: 388 QKPKPGNSYIGFQPSMRLEMEST 410


>emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
          Length = 516

 Score =  103 bits (257), Expect = 2e-20
 Identities = 48/83 (57%), Positives = 63/83 (75%)
 Frame = -1

Query: 587 LLGACRVHGNLELGERVRRHIAQLQVDHSGDYVLLSHMYANEGRWNDAFRTRQTMRGRQV 408
           LL ACRVHGNLEL E+VR+ + +L+ DHS DYVLL++MYA+ G+WN   R R++M  R V
Sbjct: 428 LLAACRVHGNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGV 487

Query: 407 QKPKPGNSLVDPQPAMMMMQESS 339
           QKPKPGNS +  QP+M +  ES+
Sbjct: 488 QKPKPGNSYIGFQPSMRLEMEST 510


>ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|222868524|gb|EEF05655.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  101 bits (251), Expect = 1e-19
 Identities = 44/76 (57%), Positives = 61/76 (80%)
 Frame = -1

Query: 587 LLGACRVHGNLELGERVRRHIAQLQVDHSGDYVLLSHMYANEGRWNDAFRTRQTMRGRQV 408
           LL ACR+HGN+ELG++VR+ + +L+ DHS DYVLL++ YA+ GRWN+A R R+TM  R V
Sbjct: 365 LLAACRLHGNVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEAMRVRKTMHKRGV 424

Query: 407 QKPKPGNSLVDPQPAM 360
           QKP+PGNS+V   P++
Sbjct: 425 QKPEPGNSVVGRHPSL 440


>ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
           gi|449477575|ref|XP_004155061.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
          Length = 506

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 39/74 (52%), Positives = 58/74 (78%)
 Frame = -1

Query: 587 LLGACRVHGNLELGERVRRHIAQLQVDHSGDYVLLSHMYANEGRWNDAFRTRQTMRGRQV 408
           LL AC++HGN+ELGERV  H+ ++  DHS DYVLL++MYA+ G+WN+  +TR++M  + V
Sbjct: 432 LLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGV 491

Query: 407 QKPKPGNSLVDPQP 366
           +KP+PGNS ++  P
Sbjct: 492 EKPEPGNSYLEINP 505


>ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487065|gb|AES68268.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 479

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/70 (55%), Positives = 59/70 (84%)
 Frame = -1

Query: 587 LLGACRVHGNLELGERVRRHIAQLQVDHSGDYVLLSHMYANEGRWNDAFRTRQTMRGRQV 408
           LL ACR +GN+ELGE+VR+H+ +L+ DHS DYVLL++MYA+ G+WN+  + R++M+ R+V
Sbjct: 394 LLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERRV 453

Query: 407 QKPKPGNSLV 378
           +KP+PGNS +
Sbjct: 454 RKPEPGNSFI 463