BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031673
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   172   3e-41
ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...   169   2e-40
ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp....   159   2e-37
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   159   2e-37
ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana] gi|3...   155   4e-36

>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
           gi|297744953|emb|CBI38545.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/110 (73%), Positives = 99/110 (90%), Gaps = 1/110 (0%)
 Frame = -3

Query: 334 YGINAHNKENVKEFLNFLQARVRELK-FDKSKFTITVMLLGIPNVGKSALANSLHQIGRI 158
           +G+N+HNK+N+KE L FLQA+V+ +K  D S +T T+ML+GIPNVGKSALANSLHQIGRI
Sbjct: 99  FGVNSHNKDNIKECLKFLQAQVKGVKKIDHSSYTATIMLVGIPNVGKSALANSLHQIGRI 158

Query: 157 SAAEKGKLKHATVSPLPGETKDITSLKIASHPNIYVLDTPGVLHPDSIDI 8
           SAAEKGKLKHATVSP+PGET+DI+SLKI SHPN+YVLDTPG+L PD +D+
Sbjct: 159 SAAEKGKLKHATVSPIPGETRDISSLKIGSHPNVYVLDTPGILPPDILDV 208


>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
           gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
           biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score =  169 bits (428), Expect = 2e-40
 Identities = 86/112 (76%), Positives = 96/112 (85%), Gaps = 1/112 (0%)
 Frame = -3

Query: 334 YGINAHNKENVKEFLNFLQARVRELKFD-KSKFTITVMLLGIPNVGKSALANSLHQIGRI 158
           YG+N+HNKEN++EFLNFLQARVRELK    S    T+ML+GIPNVGKSALANSLHQIGRI
Sbjct: 105 YGVNSHNKENIREFLNFLQARVRELKKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRI 164

Query: 157 SAAEKGKLKHATVSPLPGETKDITSLKIASHPNIYVLDTPGVLHPDSIDIEM 2
           SAAEKGKLKHA VS  PGETK+I+SLKIASHPNIYVLDTPG+  P   DIE+
Sbjct: 165 SAAEKGKLKHAVVSSQPGETKNISSLKIASHPNIYVLDTPGIFPPKIDDIEV 216


>ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320477|gb|EFH50899.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/112 (72%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
 Frame = -3

Query: 334 YGINAHNKENVKEFLNFLQARVREL-KFDKSKFTITVMLLGIPNVGKSALANSLHQIGRI 158
           Y +N+HNKE VK+FLNFLQ++VREL K   S  T T+MLLGIPN+GKSALANSLHQIGRI
Sbjct: 107 YAVNSHNKECVKQFLNFLQSQVRELHKAGYSGHTTTMMLLGIPNIGKSALANSLHQIGRI 166

Query: 157 SAAEKGKLKHATVSPLPGETKDITSLKIASHPNIYVLDTPGVLHPDSIDIEM 2
           SAAEKGKLKH TVS  PG+TKDI SLKI SHPN+YVLDTPG+  P   D E+
Sbjct: 167 SAAEKGKLKHTTVSSQPGDTKDIMSLKIGSHPNVYVLDTPGIFPPTLNDAEI 218


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score =  159 bits (402), Expect = 2e-37
 Identities = 85/119 (71%), Positives = 94/119 (78%), Gaps = 8/119 (6%)
 Frame = -3

Query: 334 YGINAHNKENVKEFLNFLQARVRELK-FDKSKFTITVMLLGIPNVGKSALANSLHQIGRI 158
           Y IN+HNK+NVKEFLNFLQ +VR LK  D S  TIT+M++GIPNVGKSALA SLH IGRI
Sbjct: 99  YAINSHNKDNVKEFLNFLQGQVRGLKNIDHSGCTITMMMVGIPNVGKSALAKSLHHIGRI 158

Query: 157 SAAEKGKLKHATVSPLPGETKDITSLK-------IASHPNIYVLDTPGVLHPDSIDIEM 2
           SAAEKGKLKHA V+P PGETKDI+SLK       I SHPNIYVLDTPGVL P   D E+
Sbjct: 159 SAAEKGKLKHAKVTPHPGETKDISSLKACSLSLIIGSHPNIYVLDTPGVLPPQIFDAEV 217


>ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana]
           gi|3600035|gb|AAC35523.1| contains similarity to
           GTP-binding proteins [Arabidopsis thaliana]
           gi|332657513|gb|AEE82913.1| GTP binding protein
           [Arabidopsis thaliana]
          Length = 377

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/112 (69%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
 Frame = -3

Query: 334 YGINAHNKENVKEFLNFLQARVREL-KFDKSKFTITVMLLGIPNVGKSALANSLHQIGRI 158
           Y +N+HNK+ VK+ LNFLQ++VREL K   S  T T+MLLGIPNVGKSAL+NSLH IGRI
Sbjct: 107 YAVNSHNKDCVKQLLNFLQSQVRELHKAGHSGHTTTMMLLGIPNVGKSALSNSLHHIGRI 166

Query: 157 SAAEKGKLKHATVSPLPGETKDITSLKIASHPNIYVLDTPGVLHPDSIDIEM 2
           SAAEKGKLKH TVS  PG+TKDI SLKI SHPN+YVLDTPG+  P+  D E+
Sbjct: 167 SAAEKGKLKHTTVSSQPGDTKDIMSLKIGSHPNVYVLDTPGIFPPNLYDAEI 218