BLASTX nr result

ID: Coptis23_contig00031658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031658
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512662.1| ATP binding protein, putative [Ricinus commu...   478   e-132
ref|XP_003551803.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   439   e-121
ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   437   e-120
ref|XP_003621621.1| LRR receptor-like serine/threonine-protein k...   437   e-120
emb|CBI29250.3| unnamed protein product [Vitis vinifera]              419   e-115

>ref|XP_002512662.1| ATP binding protein, putative [Ricinus communis]
            gi|223548623|gb|EEF50114.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1369

 Score =  478 bits (1230), Expect = e-132
 Identities = 234/310 (75%), Positives = 270/310 (87%)
 Frame = +3

Query: 246  HINAQTPSSPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMNRTPILKG 425
            H++ Q PS P +  +F   L+RI+I V+LG +TGL  AIL A+++R ++RYMNRTPILKG
Sbjct: 1012 HLSTQPPS-PSRPSQFNTGLKRILISVILGVLTGLSGAILCAYLVRCLVRYMNRTPILKG 1070

Query: 426  PVIFSPKIASATLQLALSNETQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDNATQEMQN 605
            PVIFSPKIAS TLQ AL++E QLLGSS NG YYRTVLDNGLT+AVKRL+PF++ + E QN
Sbjct: 1071 PVIFSPKIASKTLQSALASENQLLGSSSNGNYYRTVLDNGLTIAVKRLEPFESGSPERQN 1130

Query: 606  KSVKRRIQRELEMLASVRHRNLMSLRAYVRESGRFSLVYDYVPSGSLEDVMNRVRENQLQ 785
            KSVKRRIQ+ELE LAS+RHRNLMSLRAYVRES RFSLVYDYVPSGSLED M+RVREN LQ
Sbjct: 1131 KSVKRRIQQELERLASLRHRNLMSLRAYVRESDRFSLVYDYVPSGSLEDAMSRVRENHLQ 1190

Query: 786  LNWEARQRIAIGVIKGLQYLHFNCSPRILHYNLKPSNVMLDAEFEPRLADCGLAHLMPNW 965
            L+WE R RIA+G++KGL+YLHF+C P+ILHYNLKP+NVMLDAEFEPRLADCGLA LMPN 
Sbjct: 1191 LSWEVRLRIAVGIVKGLRYLHFDCVPQILHYNLKPTNVMLDAEFEPRLADCGLAKLMPNL 1250

Query: 966  GRAASSYTAPECFQNCRYTEKSDIFSFGMILAVLLTGRDPLEPFFGEASRGGSLGRWLRH 1145
             RA   Y+APECFQNCRYT+KSDIFSFGMIL VLLTGRDP +PFFGEA+ GGSLGRWLRH
Sbjct: 1251 DRATCGYSAPECFQNCRYTDKSDIFSFGMILGVLLTGRDPTDPFFGEAASGGSLGRWLRH 1310

Query: 1146 LQQAGETREA 1175
            LQQAGE +EA
Sbjct: 1311 LQQAGEAKEA 1320


>ref|XP_003551803.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Glycine max]
          Length = 1231

 Score =  439 bits (1130), Expect = e-121
 Identities = 215/317 (67%), Positives = 259/317 (81%), Gaps = 6/317 (1%)
 Frame = +3

Query: 243  EHINAQTPS------SPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMN 404
            +H++++ PS      SPP    +K   ++I++ ++LG VTGL+++ LFA V+R V++Y+N
Sbjct: 866  KHVSSEPPSPSRSTPSPPSSSGYKDDPRKIILSMVLGAVTGLVSSALFALVVRCVVQYLN 925

Query: 405  RTPILKGPVIFSPKIASATLQLALSNETQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDN 584
            RTPILKGPVIFSPKIA  TLQ AL+ E  LLGSSPNGKYY+TVLDNGLT+AVKRL PF++
Sbjct: 926  RTPILKGPVIFSPKIAPMTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFES 985

Query: 585  ATQEMQNKSVKRRIQRELEMLASVRHRNLMSLRAYVRESGRFSLVYDYVPSGSLEDVMNR 764
             + E + KSVKR+IQ ELE+LAS+RHRNLMSLRAYVRE   FSLVYDYV +GSL DV+++
Sbjct: 986  NSPEAKRKSVKRQIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVLSK 1045

Query: 765  VRENQLQLNWEARQRIAIGVIKGLQYLHFNCSPRILHYNLKPSNVMLDAEFEPRLADCGL 944
            VREN+L   WE R RIA+GV+KGLQYLHF C P+ILHYNLKP+NVMLDAEFEPRLAD GL
Sbjct: 1046 VRENELPFGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADYGL 1105

Query: 945  AHLMPNWGRAASSYTAPECFQNCRYTEKSDIFSFGMILAVLLTGRDPLEPFFGEASRGGS 1124
            A L+PN    +S YT PECF NCRYT+KSDIFSFGMIL VLLTG+DP +PFFGEA+ GGS
Sbjct: 1106 AKLLPNLDGGSSLYTPPECFHNCRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGS 1165

Query: 1125 LGRWLRHLQQAGETREA 1175
            LG WLRHLQQAGE  EA
Sbjct: 1166 LGCWLRHLQQAGEAHEA 1182


>ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Glycine max]
          Length = 1228

 Score =  437 bits (1124), Expect = e-120
 Identities = 213/317 (67%), Positives = 260/317 (82%), Gaps = 6/317 (1%)
 Frame = +3

Query: 243  EHINAQTPS------SPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMN 404
            +H++++ PS      + P    +K   ++I++ ++LG VTGL+ ++LFA V+R V++Y+N
Sbjct: 863  KHVSSEPPSPSRPSSAAPSSSGYKDDPRKIILSMVLGAVTGLVCSVLFALVVRCVVQYLN 922

Query: 405  RTPILKGPVIFSPKIASATLQLALSNETQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDN 584
            RTPILKGPVIFSPKIAS TLQ AL+ E  LLGSSPNGKYY+T+LDNGLT+AVKRL PF++
Sbjct: 923  RTPILKGPVIFSPKIASKTLQSALAKENHLLGSSPNGKYYKTMLDNGLTIAVKRLTPFES 982

Query: 585  ATQEMQNKSVKRRIQRELEMLASVRHRNLMSLRAYVRESGRFSLVYDYVPSGSLEDVMNR 764
             + E + KSVKR+IQ ELE+LAS+R+RNLMSLRAYVRE   FSLVYDY  +GSL DV+NR
Sbjct: 983  NSPEAKRKSVKRQIQTELELLASLRNRNLMSLRAYVREPDGFSLVYDYASTGSLADVLNR 1042

Query: 765  VRENQLQLNWEARQRIAIGVIKGLQYLHFNCSPRILHYNLKPSNVMLDAEFEPRLADCGL 944
            VREN+L   WE R RIA+GV+KGLQYLHF C P+ILHYNLKP+NVMLDAEFEPRLAD GL
Sbjct: 1043 VRENELPFGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADYGL 1102

Query: 945  AHLMPNWGRAASSYTAPECFQNCRYTEKSDIFSFGMILAVLLTGRDPLEPFFGEASRGGS 1124
            A L+PN  R +S YT PECF NCRYT+KSDIFSFG+IL VLLT +DP +PFFGEA+ GGS
Sbjct: 1103 AKLLPNLDRGSSLYTPPECFHNCRYTDKSDIFSFGIILGVLLTSKDPTDPFFGEAASGGS 1162

Query: 1125 LGRWLRHLQQAGETREA 1175
            LG WLRHLQQAGE+REA
Sbjct: 1163 LGCWLRHLQQAGESREA 1179


>ref|XP_003621621.1| LRR receptor-like serine/threonine-protein kinase FEI [Medicago
            truncatula] gi|355496636|gb|AES77839.1| LRR receptor-like
            serine/threonine-protein kinase FEI [Medicago truncatula]
          Length = 356

 Score =  437 bits (1123), Expect = e-120
 Identities = 216/297 (72%), Positives = 253/297 (85%), Gaps = 1/297 (0%)
 Frame = +3

Query: 288  EFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMNRTPILKGPVIFSPKIASATLQ 467
            E+K   ++I+I ++LG VTGL+ ++LFAFVIR V+ Y+NRTPILKGPVIFSPKIAS TLQ
Sbjct: 11   EYKDDPRKIIISIVLGAVTGLIGSVLFAFVIRCVVWYLNRTPILKGPVIFSPKIASKTLQ 70

Query: 468  LALSNETQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDNATQEMQNKSVKRRIQRELEML 647
            +AL+ E  +LGSSPNGKYY+TVL+NGL +AVKRL PF++ + E + KSVKR+IQ ELE+L
Sbjct: 71   VALTKENHMLGSSPNGKYYKTVLENGLIIAVKRLTPFESNSPESRKKSVKRQIQMELELL 130

Query: 648  ASVRHRNLMSLRAYVRESGRFSLVYDYVPSGSLEDVMNRVRENQLQLNWEARQRIAIGVI 827
            AS+RHRNLMSLRAYVRE+  FSLVYDYV +GSL DVMNRVREN+LQ+ WEAR RIA+GV+
Sbjct: 131  ASLRHRNLMSLRAYVRENDGFSLVYDYVSTGSLADVMNRVRENELQIGWEARLRIAVGVV 190

Query: 828  KGLQYLHFNCSPRILHYNLKPSNVMLDAEFEPRLADCGLAHLMPNWGRAASSYTAPECFQ 1007
            KGLQYLHF C P+ILH+NLKP+NVMLDAEFEPRLAD GLA L+PN  R  S    PEC  
Sbjct: 191  KGLQYLHFTCVPQILHFNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGISVNIPPECSH 250

Query: 1008 NC-RYTEKSDIFSFGMILAVLLTGRDPLEPFFGEASRGGSLGRWLRHLQQAGETREA 1175
            NC RYTEKSDIFSFGMIL VLLTG+DP +PFFGEASRGGSLG WLRHL+QAGE REA
Sbjct: 251  NCSRYTEKSDIFSFGMILGVLLTGKDPTDPFFGEASRGGSLGCWLRHLKQAGEEREA 307


>emb|CBI29250.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  419 bits (1077), Expect = e-115
 Identities = 208/309 (67%), Positives = 245/309 (79%)
 Frame = +3

Query: 249  INAQTPSSPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMNRTPILKGP 428
            ++  +  SP +  EFK  L++I++ ++ G +TGLL+A L A ++  V+RYMNRTPILKGP
Sbjct: 43   VSTDSSPSPSREAEFKSGLKKIILSIVFGVLTGLLSAALCAGIVHCVVRYMNRTPILKGP 102

Query: 429  VIFSPKIASATLQLALSNETQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDNATQEMQNK 608
            V+FSPKIA  T+Q AL                           +KRL+PF+  + E Q+K
Sbjct: 103  VVFSPKIAPKTVQSALD--------------------------IKRLEPFETGSPETQSK 136

Query: 609  SVKRRIQRELEMLASVRHRNLMSLRAYVRESGRFSLVYDYVPSGSLEDVMNRVRENQLQL 788
            SVKRRIQ+ELEMLA++RHRNLMSLRAYVR+S RFSLVYDYVP+GSLED MNRVRENQLQL
Sbjct: 137  SVKRRIQQELEMLANLRHRNLMSLRAYVRDSDRFSLVYDYVPTGSLEDAMNRVRENQLQL 196

Query: 789  NWEARQRIAIGVIKGLQYLHFNCSPRILHYNLKPSNVMLDAEFEPRLADCGLAHLMPNWG 968
            +WE R RIA+GVIKGLQYLHF+C PRILHYNLKP+NVMLDAEFEPRLADCGLA LMPN  
Sbjct: 197  SWEVRLRIAVGVIKGLQYLHFSCVPRILHYNLKPTNVMLDAEFEPRLADCGLAKLMPNLD 256

Query: 969  RAASSYTAPECFQNCRYTEKSDIFSFGMILAVLLTGRDPLEPFFGEASRGGSLGRWLRHL 1148
            RAAS Y+APECFQNCRYTEKSD+FSFG+IL VLLTGRDP++PFF EA+ GGSLGRWLRHL
Sbjct: 257  RAASGYSAPECFQNCRYTEKSDVFSFGVILGVLLTGRDPMDPFFSEAAGGGSLGRWLRHL 316

Query: 1149 QQAGETREA 1175
            QQAGE REA
Sbjct: 317  QQAGEAREA 325


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